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GENE CARD

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Gene Card

Best human hits

TBX1; TBX10; TBX18

Species

P.fumigata

Unique Gene ID

Phfumi.g00007133

Gene Model ID

Phfumi.CG.MTP2014.S5861.g07133

Location

S5861:5868..9228

Transcript Models and Sequences

  Phfumi.CG.MTP2014.S5861.g07133.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
TF_T-box PRINTS Transcription factor, T-box
TF_T-box_CS ProSitePatterns Transcription factor, T-box, conserved site
TF_T-box ProSiteProfiles Transcription factor, T-box
TF_T-box PANTHER Transcription factor, T-box
TF_T-box Pfam Transcription factor, T-box
p53-like_TF_DNA-bd SUPERFAMILY p53-like transcription factor, DNA-binding
TF_T-box SMART Transcription factor, T-box
T-box_sf Gene3D T-box superfamily

GOSlim

10 results

GO Term Annotation Origin Type
transcription regulatory region sequence-specific DNA binding Blast molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Blast molecular function
DNA binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Blast molecular function
protein binding Blast molecular function
nucleus Blast cellular component
regulation of transcription, DNA-templated InterProScan biological process
protein homodimerization activity Blast molecular function
sequence-specific DNA binding Blast molecular function
protein heterodimerization activity Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
transcription regulatory region sequence-specific DNA binding Hs molecular function 178 1.68e-52
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 215 1.70e-67
RNA polymerase II transcription corepressor activity Hs molecular function 178 1.68e-52
DNA binding Hs molecular function 215 1.70e-67
transcription factor activity, sequence-specific DNA binding Hs molecular function 215 1.70e-67
protein binding Hs molecular function 178 1.68e-52
nucleus Hs cellular component 215 1.70e-67
protein homodimerization activity Hs molecular function 215 1.70e-67
sequence-specific DNA binding Hs molecular function 215 1.70e-67
protein heterodimerization activity Hs molecular function 178 1.68e-52

GO (InterProScan)

3 results

GO Term Analysis Type e-value
transcription factor activity, sequence-specific DNA binding PANTHER molecular function 4.5E-80
nucleus PANTHER cellular component 4.5E-80
regulation of transcription, DNA-templated PANTHER biological process 4.5E-80