Aniseed - Gene card

Gene Card

Best human hits

ACTB; ACTC1; ACTG1

Species

P.fumigata

Unique Gene ID

Phfumi.g00002241

Gene Model ID

Phfumi.CG.MTP2014.S524.g02241

Location

S524:26621..28209

Transcript Models and Sequences

Phfumi.CG.MTP2014.S524.g02241.01.t
Phfumi.CG.MTP2014.S524.g02241.02.t
Phfumi.CG.MTP2014.S524.g02241.03.t
Phfumi.CG.MTP2014.S524.g02241.04.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
Actin	PRINTS	Actin family
Actin	PANTHER	Actin family
Actin	Pfam	Actin family
Actin_CS	ProSitePatterns	Actin, conserved site
Actin	SMART	Actin family
Actin/actin-like_CS	ProSitePatterns	Actin/actin-like conserved site

GOSlim

41 results

GO Term	Annotation Origin	Type
nucleotide binding	Blast	molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Blast	molecular function
protein binding	Blast	molecular function
ATP binding	Blast	molecular function
extracellular space	Blast	cellular component
nucleus	Blast	cellular component
nucleoplasm	Blast	cellular component
cytoplasm	Blast	cellular component
cytosol	Blast	cellular component
cytoskeleton	Blast	cellular component
plasma membrane	Blast	cellular component
focal adhesion	Blast	cellular component
membrane	Blast	cellular component
protein kinase binding	Blast	molecular function
lamellipodium	Blast	cellular component
ubiquitin protein ligase binding	Blast	molecular function
vesicle	Blast	cellular component
macromolecular complex	Blast	cellular component
identical protein binding	Blast	molecular function
myelin sheath	Blast	cellular component
cell body	Blast	cellular component
extracellular exosome	Blast	cellular component
intracellular non-membrane-bounded organelle	Blast	cellular component
nuclear lumen	Blast	cellular component
RNA polymerase II regulatory region sequence-specific DNA binding	Blast	molecular function
organelle organization	Blast	biological process
structural molecule activity	Blast	molecular function
cytoskeletal part	Blast	cellular component
nucleoside-triphosphatase activity	Blast	molecular function
cytoskeletal protein binding	Blast	molecular function
cytoplasmic part	Blast	cellular component
organelle part	Blast	cellular component
plasma membrane region	Blast	cellular component
cell projection	Blast	cellular component
transcription factor binding	Blast	molecular function
chromatin binding	Blast	molecular function
macromolecular complex binding	Blast	molecular function
DNA binding	Blast	molecular function
nucleoplasm part	Blast	cellular component
cytoplasmic vesicle	Blast	cellular component
enzyme binding	Blast	molecular function

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

47 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score
nucleotide binding	Hs	molecular function	739
nuclear chromatin	Hs	cellular component	738
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	738
RNA polymerase II distal enhancer sequence-specific DNA binding	Hs	molecular function	738
structural constituent of cytoskeleton	Hs	molecular function	739
protein binding	Hs	molecular function	739
profilin binding	Hs	molecular function	739
ATP binding	Hs	molecular function	739
extracellular space	Hs	cellular component	739
nucleus	Hs	cellular component	739
nucleoplasm	Hs	cellular component	738
cytoplasm	Hs	cellular component	739
cytosol	Hs	cellular component	739
cytoskeleton	Hs	cellular component	739
actin filament	Hs	cellular component	739
plasma membrane	Hs	cellular component	739
focal adhesion	Hs	cellular component	739
actin cytoskeleton	Hs	cellular component	739
membrane	Hs	cellular component	739
ATPase activity	Hs	molecular function	723
myosin binding	Hs	molecular function	723
kinesin binding	Hs	molecular function	738
protein kinase binding	Hs	molecular function	738
myofibril	Hs	cellular component	739
sarcomere	Hs	cellular component	723
lamellipodium	Hs	cellular component	723
filopodium	Hs	cellular component	723
intracellular ribonucleoprotein complex	Hs	cellular component	738
Tat protein binding	Hs	molecular function	738
nucleosomal DNA binding	Hs	molecular function	738
ubiquitin protein ligase binding	Hs	molecular function	739
I band	Hs	cellular component	723
filamentous actin	Hs	cellular component	739
vesicle	Hs	cellular component	738
macromolecular complex	Hs	cellular component	738
NuA4 histone acetyltransferase complex	Hs	cellular component	738
cytoplasmic ribonucleoprotein granule	Hs	cellular component	738
actomyosin, actin portion	Hs	cellular component	723
identical protein binding	Hs	molecular function	739
myelin sheath	Hs	cellular component	739
cell body	Hs	cellular component	723
phagocytic vesicle	Hs	cellular component	739
nitric-oxide synthase binding	Hs	molecular function	738
extracellular exosome	Hs	cellular component	739
blood microparticle	Hs	cellular component	739
dense body	Hs	cellular component	739
structural constituent of postsynaptic actin cytoskeleton	Hs	molecular function	738

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value