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GENE CARD

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Gene Card

Best human hits

HDAC1; HDAC2; HDAC3

Species

P.fumigata

Unique Gene ID

Phfumi.g00006354

Gene Model ID

Phfumi.CG.MTP2014.S4428.g06354

Location

S4428:2450..10051

Transcript Models and Sequences

  Phfumi.CG.MTP2014.S4428.g06354.01.t

External Database Gene Card

External database links

No result

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WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
His_deacetylse_1 PIRSF Histone deacetylase
Ureohydrolase_dom_sf SUPERFAMILY Ureohydrolase domain superfamily
His_deacetylse_1 PRINTS Histone deacetylase
His_deacetylse PANTHER Histone deacetylase superfamily
His_deacetylse PRINTS Histone deacetylase superfamily
His_deacetylse_dom Pfam Histone deacetylase domain
His_deacetylse_dom_sf Gene3D Histone deacetylase domain superfamily

GOSlim

33 results

GO Term Annotation Origin Type
transcription regulatory region sequence-specific DNA binding Blast molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding Blast molecular function
chromatin binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Blast molecular function
transcription corepressor activity Blast molecular function
RNA binding Blast molecular function
protein binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
Golgi apparatus Blast cellular component
cytosol Blast cellular component
plasma membrane Blast cellular component
transcription factor binding Blast molecular function
membrane Blast cellular component
integral component of membrane Blast cellular component
hydrolase activity Blast molecular function
enzyme binding Blast molecular function
macromolecular complex Blast cellular component
sequence-specific DNA binding Blast molecular function
transcription regulatory region DNA binding Blast molecular function
metal ion binding Blast molecular function
protein N-terminus binding Blast molecular function
nucleoplasm part Blast cellular component
intracellular organelle part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
nuclear lumen Blast cellular component
RNA polymerase II regulatory region sequence-specific DNA binding Blast molecular function
organelle organization Blast biological process
cellular protein modification process Blast biological process
microtubule Blast cellular component
macromolecular complex binding Blast molecular function
DNA binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

50 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
histone deacetylase complex Hs cellular component 524 0.0
chromatin Hs cellular component 524 0.0
nuclear chromatin Hs cellular component 524 0.0
transcription regulatory region sequence-specific DNA binding Hs molecular function 524 0.0
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 524 0.0
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function 524 0.0
core promoter sequence-specific DNA binding Hs molecular function 524 0.0
core promoter binding Hs molecular function 524 0.0
RNA polymerase II transcription factor binding Hs molecular function 524 0.0
RNA polymerase II repressing transcription factor binding Hs molecular function 524 0.0
RNA polymerase II transcription corepressor activity Hs molecular function 524 0.0
p53 binding Hs molecular function 524 0.0
chromatin binding Hs molecular function 520 0.0
transcription factor activity, sequence-specific DNA binding Hs molecular function 524 0.0
transcription corepressor activity Hs molecular function 412 1.90e-144
RNA binding Hs molecular function 520 0.0
histone deacetylase activity Hs molecular function 524 0.0
protein binding Hs molecular function 524 0.0
nucleus Hs cellular component 524 0.0
nucleoplasm Hs cellular component 524 0.0
cytoplasm Hs cellular component 524 0.0
Golgi apparatus Hs cellular component 412 1.90e-144
cytosol Hs cellular component 524 0.0
spindle microtubule Hs cellular component 412 1.90e-144
plasma membrane Hs cellular component 412 1.90e-144
transcription factor binding Hs molecular function 524 0.0
membrane Hs cellular component 520 0.0
integral component of membrane Hs cellular component 520 0.0
Sin3 complex Hs cellular component 524 0.0
NuRD complex Hs cellular component 524 0.0
hydrolase activity Hs molecular function 524 0.0
transcriptional repressor complex Hs cellular component 412 1.90e-144
deacetylase activity Hs molecular function 524 0.0
enzyme binding Hs molecular function 524 0.0
cyclin binding Hs molecular function 412 1.90e-144
heat shock protein binding Hs molecular function 520 0.0
nucleosomal DNA binding Hs molecular function 524 0.0
NAD-dependent histone deacetylase activity (H3-K14 specific) Hs molecular function 524 0.0
macromolecular complex Hs cellular component 524 0.0
protein deacetylase activity Hs molecular function 524 0.0
activating transcription factor binding Hs molecular function 524 0.0
ESC/E(Z) complex Hs cellular component 520 0.0
histone deacetylase binding Hs molecular function 524 0.0
sequence-specific DNA binding Hs molecular function 520 0.0
transcription regulatory region DNA binding Hs molecular function 524 0.0
metal ion binding Hs molecular function 524 0.0
protein N-terminus binding Hs molecular function 524 0.0
NF-kappaB binding Hs molecular function 524 0.0
repressing transcription factor binding Hs molecular function 524 0.0
promoter-specific chromatin binding Hs molecular function 520 0.0

GO (InterProScan)

2 results

GO Term Analysis Type e-value
histone deacetylase activity PIRSF molecular function 2.0E-164
histone deacetylation PIRSF biological process 2.0E-164

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