Aniseed - Gene card

External Database Gene Card

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WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

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Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
HAT	SMART	HAT (Half-A-TPR) repeat
TPR-like_helical_dom_sf	SUPERFAMILY	Tetratricopeptide-like helical domain superfamily
TPR-like_helical_dom_sf	Gene3D	Tetratricopeptide-like helical domain superfamily

GOSlim

24 results

GO Term	Annotation Origin	Type
mRNA splicing, via spliceosome	Orthology	biological process
cell morphogenesis	Orthology	biological process
nucleic acid binding	Orthology	molecular function
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
RNA processing	Orthology	biological process
mRNA processing	Orthology	biological process
RNA splicing	Orthology	biological process
regulation of gene expression	Orthology	biological process
nuclear speck	Orthology	cellular component
nuclear part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
organelle organization	Orthology	biological process
DNA binding	Orthology	molecular function
nuclear body	Orthology	cellular component
cell proliferation	Orthology	biological process
animal organ development	Orthology	biological process
immune system process	Orthology	biological process
cell division	Orthology	biological process
peptidase activity, acting on L-amino acid peptides	Orthology	molecular function
enzyme binding	Orthology	molecular function

GO (Orthology)

26 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
spliceosomal tri-snRNP complex assembly	Hs	biological process
spliceosomal snRNP assembly	Hs	biological process
mRNA splicing, via spliceosome	Hs	biological process
cell morphogenesis	Hs	biological process
nucleic acid binding	Hs	molecular function
RNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
U6atac snRNP	Hs	cellular component
cytoplasm	Hs	cellular component
nucleosome assembly	Hs	biological process
RNA processing	Hs	biological process
mRNA processing	Hs	biological process
RNA splicing	Hs	biological process
regulation of gene expression	Hs	biological process
Cajal body	Hs	cellular component
nuclear speck	Hs	cellular component
U6 snRNA binding	Hs	molecular function
U4 snRNA binding	Hs	molecular function
U6atac snRNA binding	Hs	molecular function
histone binding	Hs	molecular function
U4/U6 snRNP	Hs	cellular component
hematopoietic stem cell proliferation	Hs	biological process
positive regulation of histone deubiquitination	Hs	biological process
ubiquitin-specific protease binding	Hs	molecular function

GO (Blast)

24 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
Prp19 complex	Hs	cellular component	52.8	6.60e-07
nucleic acid binding	Hs	molecular function	414	5.70e-133
RNA binding	Hs	molecular function	414	5.70e-133
mRNA binding	Hs	molecular function	40.8	0.003
protein binding	Hs	molecular function	414	5.70e-133
nucleus	Hs	cellular component	414	5.70e-133
nucleoplasm	Hs	cellular component	414	5.70e-133
spliceosomal complex	Hs	cellular component	52.8	6.60e-07
U6atac snRNP	Hs	cellular component	414	5.70e-133
cytoplasm	Hs	cellular component	414	5.70e-133
Cajal body	Hs	cellular component	414	5.70e-133
nuclear speck	Hs	cellular component	414	5.70e-133
U6 snRNA binding	Hs	molecular function	414	5.70e-133
U4 snRNA binding	Hs	molecular function	414	5.70e-133
U6atac snRNA binding	Hs	molecular function	414	5.70e-133
histone binding	Hs	molecular function	414	5.70e-133
U4/U6 snRNP	Hs	cellular component	414	5.70e-133
U2-type catalytic step 2 spliceosome	Hs	cellular component	52.8	6.60e-07
prespliceosome	Hs	cellular component	52.8	6.60e-07
precatalytic spliceosome	Hs	cellular component	52.8	6.60e-07
catalytic step 1 spliceosome	Hs	cellular component	52.8	6.60e-07
catalytic step 2 spliceosome	Hs	cellular component	52.8	6.60e-07
post-mRNA release spliceosomal complex	Hs	cellular component	52.8	6.60e-07
ubiquitin-specific protease binding	Hs	molecular function	414	5.70e-133

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
protein binding	SUPERFAMILY	molecular function	8.53E-57
RNA processing	SMART	biological process	0.0073

Gene Card

Best human hits

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Unique Gene ID

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