Aniseed - Gene card

Gene 'Phfumi.CG.MTP2014.S3...'

Gene Card

Best human hits

DDX24; DDX47

Species

P.fumigata

Unique Gene ID

Phfumi.g00000528

Gene Model ID

Phfumi.CG.MTP2014.S36.g00528

Location

S36:10342..16965

Transcript Models and Sequences

Phfumi.CG.MTP2014.S36.g00528.01.t
Phfumi.CG.MTP2014.S36.g00528.02.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term	Analysis	Definition
Helicase_C	CDD	Helicase, C-terminal
DEAD/DEAH_box_helicase_dom	Pfam	DEAD/DEAH box helicase domain
Helicase_C	ProSiteProfiles	Helicase, C-terminal
Helicase_ATP-bd	ProSiteProfiles	Helicase superfamily 1/2, ATP-binding domain
Helicase_C	SMART	Helicase, C-terminal
Helicase_ATP-bd	SMART	Helicase superfamily 1/2, ATP-binding domain
RNA_helicase_DEAD_Q_motif	ProSiteProfiles	RNA helicase, DEAD-box type, Q motif
Helicase_C	Pfam	Helicase, C-terminal
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase
RNA-helicase_DEAD-box_CS	ProSitePatterns	ATP-dependent RNA helicase DEAD-box, conserved site

GOSlim

13 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
nucleic acid binding	Orthology	molecular function
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
nucleus	Blast	cellular component
nucleoplasm	Blast	cellular component
nucleolus	Orthology	cellular component
cytoplasm	Orthology	cellular component
membrane	Orthology	cellular component
RNA metabolic process	Orthology	biological process
hydrolase activity	Orthology	molecular function
nucleoside-triphosphatase activity	Orthology	molecular function

GO (Orthology)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
nucleic acid binding	Hs	molecular function
RNA binding	Hs	molecular function
RNA helicase activity	Hs	molecular function
ATP-dependent RNA helicase activity	Hs	molecular function
helicase activity	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
nucleolus	Hs	cellular component
cytoplasm	Hs	cellular component
RNA secondary structure unwinding	Hs	biological process
membrane	Hs	cellular component
RNA metabolic process	Hs	biological process
hydrolase activity	Hs	molecular function

GO (Blast)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	450	2.21e-147
nucleic acid binding	Hs	molecular function	450	2.21e-147
RNA binding	Hs	molecular function	450	2.21e-147
RNA helicase activity	Hs	molecular function	450	2.21e-147
ATP-dependent RNA helicase activity	Hs	molecular function	450	2.21e-147
helicase activity	Hs	molecular function	450	2.21e-147
protein binding	Hs	molecular function	450	2.21e-147
ATP binding	Hs	molecular function	450	2.21e-147
nucleus	Hs	cellular component	219	4.83e-64
nucleoplasm	Hs	cellular component	219	4.83e-64
nucleolus	Hs	cellular component	450	2.21e-147
cytoplasm	Hs	cellular component	450	2.21e-147
membrane	Hs	cellular component	450	2.21e-147
hydrolase activity	Hs	molecular function	450	2.21e-147

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
nucleic acid binding	Pfam	molecular function	3.2E-43
ATP binding	Pfam	molecular function	3.2E-43