Aniseed - Gene card

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

10 results

IPR Term	Analysis	Definition
Rho_GTPase_activation_prot	SUPERFAMILY	Rho GTPase activation protein
CRAL-TRIO_dom_sf	Gene3D	CRAL-TRIO lipid binding domain superfamily
CRAL-TRIO_dom	SMART	CRAL-TRIO lipid binding domain
CRAL-TRIO_dom	Pfam	CRAL-TRIO lipid binding domain
RhoGAP_dom	Pfam	Rho GTPase-activating protein domain
CRAL-TRIO_dom	CDD	CRAL-TRIO lipid binding domain
CRAL-TRIO_dom	ProSiteProfiles	CRAL-TRIO lipid binding domain
CRAL-TRIO_dom_sf	SUPERFAMILY	CRAL-TRIO lipid binding domain superfamily
Rho_GTPase_activation_prot	Gene3D	Rho GTPase activation protein
RhoGAP_dom	ProSiteProfiles	Rho GTPase-activating protein domain

GOSlim

26 results

GO Term	Annotation Origin	Type
GTPase activator activity	Orthology	molecular function
protein binding	Orthology	molecular function
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
signal transduction	Orthology	biological process
small GTPase mediated signal transduction	Orthology	biological process
positive regulation of signal transduction	Orthology	biological process
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
regulation of GTPase activity	Orthology	biological process
positive regulation of GTPase activity	Orthology	biological process
perinuclear region of cytoplasm	Orthology	cellular component
extracellular exosome	Orthology	cellular component
intracellular organelle part	Orthology	cellular component
whole membrane	Orthology	cellular component
endosome	Orthology	cellular component
bounding membrane of organelle	Orthology	cellular component
intracellular transport	Orthology	biological process
enzyme binding	Orthology	molecular function
protein transport	Orthology	biological process
metal ion transport	Orthology	biological process
cell adhesion molecule binding	Orthology	molecular function
regulation of signal transduction	Orthology	biological process
intracellular signal transduction	Orthology	biological process
protein phosphorylation	Orthology	biological process
transmembrane transport	Orthology	biological process

GO (Orthology)

26 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
SH3/SH2 adaptor activity	Hs	molecular function
GTPase activator activity	Hs	molecular function
protein binding	Hs	molecular function
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
signal transduction	Hs	biological process
small GTPase mediated signal transduction	Hs	biological process
Rho protein signal transduction	Hs	biological process
positive regulation of signal transduction	Hs	biological process
endosome membrane	Hs	cellular component
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
endosomal transport	Hs	biological process
SH3 domain binding	Hs	molecular function
Rab GTPase binding	Hs	molecular function
transferrin transport	Hs	biological process
regulation of GTPase activity	Hs	biological process
positive regulation of GTPase activity	Hs	biological process
cadherin binding	Hs	molecular function
perinuclear region of cytoplasm	Hs	cellular component
regulation of small GTPase mediated signal transduction	Hs	biological process
extracellular exosome	Hs	cellular component
positive regulation of ERK1 and ERK2 cascade	Hs	biological process
sorting endosome	Hs	cellular component
ferric iron import across plasma membrane	Hs	biological process
negative regulation of endocytic recycling	Hs	biological process

GO (Blast)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
SH3/SH2 adaptor activity	Hs	molecular function	264	3.88e-86
GTPase activator activity	Hs	molecular function	264	3.88e-86
protein binding	Hs	molecular function	264	3.88e-86
cytoplasm	Hs	cellular component	264	3.88e-86
cytosol	Hs	cellular component	264	3.88e-86
endosome membrane	Hs	cellular component	264	3.88e-86
membrane	Hs	cellular component	264	3.88e-86
integral component of membrane	Hs	cellular component	264	3.88e-86
SH3 domain binding	Hs	molecular function	264	3.88e-86
Rab GTPase binding	Hs	molecular function	264	3.88e-86
cadherin binding	Hs	molecular function	264	3.88e-86
perinuclear region of cytoplasm	Hs	cellular component	264	3.88e-86
extracellular exosome	Hs	cellular component	264	3.88e-86
sorting endosome	Hs	cellular component	264	3.88e-86

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
signal transduction	Gene3D	biological process	1.6E-14

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location