Gene Card
Best human hits
TRIM2; TRIM3; TRIM56
Species
Unique Gene ID
Phfumi.g00005445
Gene Model ID
Phfumi.CG.MTP2014.S3114.g05445
Location
S3114:2387..9354
Transcript Models and Sequences
Phfumi.CG.MTP2014.S3114.g05445.01.t
Phfumi.CG.MTP2014.S3114.g05445.02.t
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
12 results
| IPR Term | Analysis | Definition |
|---|---|---|
| NHL_repeat_subgr | ProSiteProfiles | NHL repeat, subgroup |
| Znf_RING | SMART | Zinc finger, RING-type |
| Znf_RING | ProSiteProfiles | Zinc finger, RING-type |
| Znf_B-box | Pfam | B-box-type zinc finger |
| Znf_RING/FYVE/PHD | Gene3D | Zinc finger, RING/FYVE/PHD-type |
| Znf_B-box | ProSiteProfiles | B-box-type zinc finger |
| Znf-RING_LisH | Pfam | RING-type zinc-finger, LisH dimerisation motif |
| NHL_repeat | Pfam | NHL repeat |
| 6-blade_b-propeller_TolB-like | Gene3D | Six-bladed beta-propeller, TolB-like |
| Znf_B-box | CDD | B-box-type zinc finger |
| Znf_B-box | SMART | B-box-type zinc finger |
| Znf_RING_CS | ProSitePatterns | Zinc finger, RING-type, conserved site |
GOSlim
14 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| RNA binding | Blast | molecular function |
| ubiquitin-protein transferase activity | Blast | molecular function |
| protein binding | Blast | molecular function |
| intracellular | Blast | cellular component |
| cytoplasm | Blast | cellular component |
| endosome | Blast | cellular component |
| early endosome | Blast | cellular component |
| Golgi apparatus | Blast | cellular component |
| cytosol | Blast | cellular component |
| protein C-terminus binding | Blast | molecular function |
| zinc ion binding | Blast | molecular function |
| transferase activity | Blast | molecular function |
| cell projection | Blast | cellular component |
| metal ion binding | Blast | molecular function |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
16 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| RNA binding | Hs | molecular function | 149 | 4.94e-37 |
| ubiquitin-protein transferase activity | Hs | molecular function | 189 | 3.45e-50 |
| protein binding | Hs | molecular function | 189 | 3.45e-50 |
| intracellular | Hs | cellular component | 189 | 3.45e-50 |
| cytoplasm | Hs | cellular component | 189 | 3.45e-50 |
| endosome | Hs | cellular component | 166 | 1.10e-42 |
| early endosome | Hs | cellular component | 166 | 1.10e-42 |
| Golgi apparatus | Hs | cellular component | 166 | 1.10e-42 |
| cytosol | Hs | cellular component | 149 | 4.94e-37 |
| protein C-terminus binding | Hs | molecular function | 166 | 1.10e-42 |
| zinc ion binding | Hs | molecular function | 189 | 3.45e-50 |
| transferase activity | Hs | molecular function | 189 | 3.45e-50 |
| dendrite | Hs | cellular component | 166 | 1.10e-42 |
| cell projection | Hs | cellular component | 166 | 1.10e-42 |
| metal ion binding | Hs | molecular function | 189 | 3.45e-50 |
| ubiquitin protein ligase activity | Hs | molecular function | 166 | 1.10e-42 |
GO (InterProScan)
3 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| protein binding | Pfam | molecular function | 6.7E-6 |
| intracellular | CDD | cellular component | 9.92336E-8 |
| zinc ion binding | CDD | molecular function | 9.92336E-8 |
