Aniseed - Gene card

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
ATP_grasp_subdomain_1	Gene3D	ATP-grasp fold, subdomain 1
TTL/TTLL_fam	Pfam	Tubulin-tyrosine ligase/Tubulin polyglutamylase
TTLL6	PANTHER	Tubulin polyglutamylase TTLL6
TTL/TTLL_fam	ProSiteProfiles	Tubulin-tyrosine ligase/Tubulin polyglutamylase

GOSlim

19 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
cytoskeleton	Orthology	cellular component
microtubule	Orthology	cellular component
cellular protein modification process	Orthology	biological process
tubulin binding	Orthology	molecular function
ligase activity	Orthology	molecular function
cell projection	Orthology	cellular component
microtubule-based process	Orthology	biological process
organelle organization	Orthology	biological process
organelle	Orthology	cellular component
plasma membrane region	Orthology	cellular component
macromolecular complex	Orthology	cellular component
cell projection part	Orthology	cellular component
microtubule organizing center	Orthology	cellular component
neuronal cell body	Blast	cellular component

GO (Orthology)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
microtubule bundle formation	Hs	biological process
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
cytoskeleton	Hs	cellular component
microtubule	Hs	cellular component
cilium	Hs	cellular component
cellular protein modification process	Hs	biological process
tubulin binding	Hs	molecular function
ligase activity	Hs	molecular function
protein polyglutamylation	Hs	biological process
ciliary basal body	Hs	cellular component
cell projection	Hs	cellular component
microtubule severing	Hs	biological process
protein-glutamic acid ligase activity	Hs	molecular function
tubulin-glutamic acid ligase activity	Hs	molecular function

GO (Blast)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	446	9.96e-146
protein binding	Hs	molecular function	446	9.96e-146
ATP binding	Hs	molecular function	446	9.96e-146
cytoplasm	Hs	cellular component	446	9.96e-146
cytosol	Hs	cellular component	446	9.96e-146
cytoskeleton	Hs	cellular component	446	9.96e-146
microtubule	Hs	cellular component	446	9.96e-146
cilium	Hs	cellular component	446	9.96e-146
tubulin binding	Hs	molecular function	446	9.96e-146
ligase activity	Hs	molecular function	446	9.96e-146
dendrite	Hs	cellular component	259	2.36e-75
ciliary basal body	Hs	cellular component	446	9.96e-146
cell projection	Hs	cellular component	446	9.96e-146
alpha-tubulin binding	Hs	molecular function	259	2.36e-75
perikaryon	Hs	cellular component	259	2.36e-75
beta-tubulin binding	Hs	molecular function	259	2.36e-75
protein-glutamic acid ligase activity	Hs	molecular function	446	9.96e-146
tubulin-glutamic acid ligase activity	Hs	molecular function	446	9.96e-146

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
ATP binding	Gene3D	molecular function	3.8E-70
cellular protein modification process	Pfam	biological process	1.3E-66

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location