Aniseed - Gene card

Gene Card

Best human hits

AC004223.3; RFFL; RNF34

Species

P.fumigata

Unique Gene ID

Phfumi.g00004794

Gene Model ID

Phfumi.CG.MTP2014.S2381.g04794

Location

S2381:4682..5504

Transcript Models and Sequences

Phfumi.CG.MTP2014.S2381.g04794.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

2 results

IPR Term	Analysis	Definition
E3ligase_BOI_like	PIRSF	E3 ubiquitin-protein ligase BOI-like
Znf_RING	ProSiteProfiles	Zinc finger, RING-type

GOSlim

25 results

GO Term	Annotation Origin	Type
DNA binding	Blast	molecular function
ubiquitin-protein transferase activity	Blast	molecular function
protein binding	Blast	molecular function
ATP binding	Blast	molecular function
nucleus	Blast	cellular component
nucleoplasm	Blast	cellular component
cytoplasm	Blast	cellular component
endosome	Blast	cellular component
cytosol	Blast	cellular component
plasma membrane	Blast	cellular component
endomembrane system	Blast	cellular component
membrane	Blast	cellular component
nuclear body	Blast	cellular component
nuclear speck	Blast	cellular component
transferase activity	Blast	molecular function
protein kinase binding	Blast	molecular function
ubiquitin protein ligase binding	Blast	molecular function
metal ion binding	Blast	molecular function
enzyme binding	Blast	molecular function
macromolecular complex	Blast	cellular component
nucleoside-triphosphatase activity	Blast	molecular function
intracellular organelle part	Blast	cellular component
whole membrane	Blast	cellular component
bounding membrane of organelle	Blast	cellular component
anion binding	Blast	molecular function

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

26 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
protease binding	Hs	molecular function	130	1.14e-35
p53 binding	Hs	molecular function	130	1.14e-35
tumor necrosis factor receptor superfamily complex	Hs	cellular component	130	1.14e-35
DNA binding	Hs	molecular function	118	5.88e-32
ubiquitin-protein transferase activity	Hs	molecular function	96.7	1.26e-22
protein binding	Hs	molecular function	130	1.14e-35
ATP binding	Hs	molecular function	118	5.88e-32
nucleus	Hs	cellular component	96.7	1.26e-22
nucleoplasm	Hs	cellular component	130	1.14e-35
cytoplasm	Hs	cellular component	130	1.14e-35
endosome	Hs	cellular component	130	1.14e-35
cytosol	Hs	cellular component	130	1.14e-35
plasma membrane	Hs	cellular component	130	1.14e-35
DNA-dependent ATPase activity	Hs	molecular function	118	5.88e-32
endosome membrane	Hs	cellular component	130	1.14e-35
endomembrane system	Hs	cellular component	96.7	1.26e-22
membrane	Hs	cellular component	130	1.14e-35
nuclear body	Hs	cellular component	96.7	1.26e-22
nuclear speck	Hs	cellular component	96.7	1.26e-22
transferase activity	Hs	molecular function	130	1.14e-35
protein kinase binding	Hs	molecular function	130	1.14e-35
ubiquitin protein ligase binding	Hs	molecular function	130	1.14e-35
metal ion binding	Hs	molecular function	130	1.14e-35
recycling endosome membrane	Hs	cellular component	130	1.14e-35
ubiquitin protein ligase activity	Hs	molecular function	130	1.14e-35
phosphatidylinositol phosphate binding	Hs	molecular function	96.7	1.26e-22

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value