Gene Card
Best human hits
CHRNA1; CHRNA3; CHRNA6
Species
Unique Gene ID
Phfumi.g00004647
Gene Model ID
Phfumi.CG.MTP2014.S2246.g04647
Location
S2246:16536..18451
Transcript Models and Sequences
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
3 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Neurotrans-gated_channel_TM | Pfam | Neurotransmitter-gated ion-channel transmembrane domain |
| Neur_channel | PANTHER | Neurotransmitter-gated ion-channel |
| Neuro-gated_channel_TM_sf | SUPERFAMILY | Neurotransmitter-gated ion-channel transmembrane domain superfamily |
GOSlim
27 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| transmembrane signaling receptor activity | Blast | molecular function |
| protein binding | Blast | molecular function |
| plasma membrane | Blast | cellular component |
| ion transport | Blast | biological process |
| cation transport | Blast | biological process |
| signal transduction | Blast | biological process |
| chemical synaptic transmission | Blast | biological process |
| cell surface | Blast | cellular component |
| membrane | Blast | cellular component |
| integral component of membrane | Blast | cellular component |
| cell junction | Blast | cellular component |
| neuronal cell body | Blast | cellular component |
| synapse | Blast | cellular component |
| postsynaptic membrane | Blast | cellular component |
| transmembrane transport | Blast | biological process |
| integral component of plasma membrane | Blast | cellular component |
| macromolecular complex | Blast | cellular component |
| organelle | Blast | cellular component |
| postsynapse | Blast | cellular component |
| neuron part | Blast | cellular component |
| cation binding | Blast | molecular function |
| cell surface receptor signaling pathway | Blast | biological process |
| nervous system process | Blast | biological process |
| signaling receptor activity | Blast | molecular function |
| binding | Blast | molecular function |
| membrane raft | Blast | cellular component |
| plasma membrane region | Blast | cellular component |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
22 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| transmembrane signaling receptor activity | Hs | molecular function | 163 | 1.25e-48 |
| ion channel activity | Hs | molecular function | 163 | 1.25e-48 |
| extracellular ligand-gated ion channel activity | Hs | molecular function | 163 | 1.25e-48 |
| protein binding | Hs | molecular function | 156 | 5.66e-46 |
| plasma membrane | Hs | cellular component | 163 | 1.25e-48 |
| acetylcholine-gated channel complex | Hs | cellular component | 163 | 1.25e-48 |
| cell surface | Hs | cellular component | 163 | 1.25e-48 |
| postsynaptic density | Hs | cellular component | 155 | 1.28e-45 |
| ligand-gated ion channel activity | Hs | molecular function | 163 | 1.25e-48 |
| acetylcholine receptor activity | Hs | molecular function | 163 | 1.25e-48 |
| membrane | Hs | cellular component | 163 | 1.25e-48 |
| integral component of membrane | Hs | cellular component | 163 | 1.25e-48 |
| acetylcholine-gated cation-selective channel activity | Hs | molecular function | 163 | 1.25e-48 |
| serotonin-gated cation-selective channel activity | Hs | molecular function | 155 | 1.28e-45 |
| cell junction | Hs | cellular component | 163 | 1.25e-48 |
| dendrite | Hs | cellular component | 155 | 1.28e-45 |
| neuromuscular junction | Hs | cellular component | 163 | 1.25e-48 |
| acetylcholine binding | Hs | molecular function | 163 | 1.25e-48 |
| neuronal cell body | Hs | cellular component | 155 | 1.28e-45 |
| plasma membrane raft | Hs | cellular component | 155 | 1.28e-45 |
| synapse | Hs | cellular component | 163 | 1.25e-48 |
| postsynaptic membrane | Hs | cellular component | 163 | 1.25e-48 |
GO (InterProScan)
5 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| transmembrane signaling receptor activity | PANTHER | molecular function | 6.6E-56 |
| ion channel activity | PANTHER | molecular function | 6.6E-56 |
| ion transport | SUPERFAMILY | biological process | 1.44E-40 |
| integral component of membrane | PANTHER | cellular component | 6.6E-56 |
| ion transmembrane transport | PANTHER | biological process | 6.6E-56 |
