Login
Help

GENE CARD

Submit your Data

  1. Gene 'Phfumi.CG.MTP2014.S2...'

Gene Card

Best human hits

HSPBAP1; KDM8; TYW5

Species

P.fumigata

Unique Gene ID

Phfumi.g00004479

Gene Model ID

Phfumi.CG.MTP2014.S2075.g04479

Location

S2075:16182..17801

Transcript Models and Sequences

  Phfumi.CG.MTP2014.S2075.g04479.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
JmjC_dom ProSiteProfiles JmjC domain
JmjC_dom SMART JmjC domain

GOSlim

17 results

GO Term Annotation Origin Type
chromatin binding Blast molecular function
iron ion binding Blast molecular function
protein binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
cytosol Blast cellular component
peptidase activity Blast molecular function
hydrolase activity Blast molecular function
protein homodimerization activity Blast molecular function
metal ion binding Blast molecular function
oxidation-reduction process Blast biological process
RNA binding Blast molecular function
intracellular non-membrane-bounded organelle Blast cellular component
catalytic activity Blast molecular function
organelle organization Blast biological process
cellular protein modification process Blast biological process

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
tRNA binding Hs molecular function 40.8 5.66e-04
chromatin binding Hs molecular function 50.4 5.30e-07
iron ion binding Hs molecular function 40.8 5.66e-04
protein binding Hs molecular function 37.7 0.006
nucleus Hs cellular component 50.4 5.30e-07
nucleoplasm Hs cellular component 50.4 5.30e-07
chromosome Hs cellular component 50.4 5.30e-07
cytoplasm Hs cellular component 40.8 5.66e-04
cytosol Hs cellular component 50.4 5.30e-07
peptidase activity Hs molecular function 50.4 5.30e-07
oxidoreductase activity Hs molecular function 50.4 5.30e-07
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors Hs molecular function 40.8 5.66e-04
hydrolase activity Hs molecular function 50.4 5.30e-07
histone demethylase activity Hs molecular function 50.4 5.30e-07
protein homodimerization activity Hs molecular function 40.8 5.66e-04
metal ion binding Hs molecular function 50.4 5.30e-07
dioxygenase activity Hs molecular function 50.4 5.30e-07
histone demethylase activity (H3-K36 specific) Hs molecular function 50.4 5.30e-07
tRNAPhe (7-(3-amino-3-carboxypropyl)wyosine37-C2)-hydroxylase activity Hs molecular function 40.8 5.66e-04

GO (InterProScan)

No result

GO Term Analysis Type e-value