Aniseed - Gene card

Gene 'Phfumi.CG.MTP2014.S1...'

Gene Card

Best human hits

CNOT2; CNOT3

Species

P.fumigata

Unique Gene ID

Phfumi.g00004116

Gene Model ID

Phfumi.CG.MTP2014.S1788.g04116

Location

S1788:8141..16000

Transcript Models and Sequences

Phfumi.CG.MTP2014.S1788.g04116.01.t
Phfumi.CG.MTP2014.S1788.g04116.02.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term	Analysis	Definition
CCR4-NOT_su2/3/5_N_sf	Gene3D	CCR4-NOT complex subunit 2/3/5, N-terminal domain superfamily
NOT	Pfam	NOT2/NOT3/NOT5

GOSlim

25 results

GO Term	Annotation Origin	Type
negative regulation of transcription from RNA polymerase II promoter	Orthology	biological process
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
plasma membrane	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
multicellular organism development	Orthology	biological process
membrane	Orthology	cellular component
nuclear-transcribed mRNA catabolic process	Orthology	biological process
cytoplasmic part	Orthology	cellular component
intracellular non-membrane-bounded organelle	Orthology	cellular component
macromolecular complex	Orthology	cellular component
transcription factor binding	Orthology	molecular function
RNA metabolic process	Orthology	biological process
hydrolase activity	Orthology	molecular function
regulation of gene expression	Orthology	biological process
negative regulation of gene expression	Orthology	biological process
intracellular part	Orthology	cellular component
cellular process	Orthology	biological process
negative regulation of signal transduction	Orthology	biological process
response to lipid	Orthology	biological process
cellular response to organic substance	Orthology	biological process

GO (Orthology)

25 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	Hs	biological process
nuclear-transcribed mRNA poly(A) tail shortening	Hs	biological process
P-body	Hs	cellular component
RNA polymerase II transcription cofactor activity	Hs	molecular function
RNA polymerase II transcription corepressor binding	Hs	molecular function
poly(A)-specific ribonuclease activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
plasma membrane	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
regulation of translation	Hs	biological process
multicellular organism development	Hs	biological process
positive regulation of cytoplasmic mRNA processing body assembly	Hs	biological process
membrane	Hs	cellular component
negative regulation of translation	Hs	biological process
CCR4-NOT complex	Hs	cellular component
CCR4-NOT core complex	Hs	cellular component
gene silencing by RNA	Hs	biological process
negative regulation of intracellular estrogen receptor signaling pathway	Hs	biological process
RNA phosphodiester bond hydrolysis, exonucleolytic	Hs	biological process

GO (Blast)

12 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
P-body	Hs	cellular component	421	2.00e-143
RNA polymerase II transcription cofactor activity	Hs	molecular function	421	2.00e-143
RNA polymerase II transcription corepressor binding	Hs	molecular function	421	2.00e-143
poly(A)-specific ribonuclease activity	Hs	molecular function	421	2.00e-143
protein binding	Hs	molecular function	421	2.00e-143
nucleus	Hs	cellular component	421	2.00e-143
cytoplasm	Hs	cellular component	421	2.00e-143
cytosol	Hs	cellular component	421	2.00e-143
plasma membrane	Hs	cellular component	421	2.00e-143
membrane	Hs	cellular component	421	2.00e-143
CCR4-NOT complex	Hs	cellular component	421	2.00e-143
CCR4-NOT core complex	Hs	cellular component	421	2.00e-143

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
nucleus	Pfam	cellular component	4.7E-31
regulation of transcription, DNA-templated	Pfam	biological process	4.7E-31
CCR4-NOT core complex	PANTHER	cellular component	8.4E-124