Aniseed - Gene card

Gene 'Phfumi.CG.MTP2014.S1...'

Gene Card

Best human hits

TSTA3

Species

P.fumigata

Unique Gene ID

Phfumi.g00001218

Gene Model ID

Phfumi.CG.MTP2014.S155.g01218

Location

S155:38334..40775

Transcript Models and Sequences

Phfumi.CG.MTP2014.S155.g01218.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

2 results

IPR Term	Analysis	Definition
NAD(P)-bd_dom_sf	SUPERFAMILY	NAD(P)-binding domain superfamily
Epimerase_deHydtase	Pfam	NAD-dependent epimerase/dehydratase

GOSlim

9 results

GO Term	Annotation Origin	Type
catalytic activity	Orthology	molecular function
cytosol	Orthology	cellular component
metabolic process	Orthology	biological process
identical protein binding	Orthology	molecular function
coenzyme binding	Orthology	molecular function
oxidation-reduction process	Orthology	biological process
extracellular exosome	Orthology	cellular component
cellular metabolic process	Orthology	biological process
nucleobase-containing compound metabolic process	Orthology	biological process

GO (Orthology)

17 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
catalytic activity	Hs	molecular function
cytosol	Hs	cellular component
metabolic process	Hs	biological process
electron carrier activity	Hs	molecular function
nucleotide-sugar biosynthetic process	Hs	biological process
oxidoreductase activity	Hs	molecular function
isomerase activity	Hs	molecular function
racemase and epimerase activity, acting on carbohydrates and derivatives	Hs	molecular function
GDP-mannose metabolic process	Hs	biological process
electron transport chain	Hs	biological process
'de novo' GDP-L-fucose biosynthetic process	Hs	biological process
GDP-4-dehydro-D-rhamnose reductase activity	Hs	molecular function
identical protein binding	Hs	molecular function
GDP-L-fucose synthase activity	Hs	molecular function
coenzyme binding	Hs	molecular function
oxidation-reduction process	Hs	biological process
extracellular exosome	Hs	cellular component

GO (Blast)

11 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
catalytic activity	Hs	molecular function	300	2.72e-103
cytosol	Hs	cellular component	300	2.72e-103
electron carrier activity	Hs	molecular function	300	2.72e-103
oxidoreductase activity	Hs	molecular function	300	2.72e-103
isomerase activity	Hs	molecular function	300	2.72e-103
racemase and epimerase activity, acting on carbohydrates and derivatives	Hs	molecular function	300	2.72e-103
GDP-4-dehydro-D-rhamnose reductase activity	Hs	molecular function	300	2.72e-103
identical protein binding	Hs	molecular function	300	2.72e-103
GDP-L-fucose synthase activity	Hs	molecular function	300	2.72e-103
coenzyme binding	Hs	molecular function	300	2.72e-103
extracellular exosome	Hs	cellular component	300	2.72e-103

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
catalytic activity	Pfam	molecular function	1.6E-20
coenzyme binding	Pfam	molecular function	1.6E-20