Login
Help

GENE CARD

Submit your Data

  1. Gene 'Phfumi.CG.MTP2014.S1...'

Gene Card

Best human hits

ATG10; ATG3

Species

P.fumigata

Unique Gene ID

Phfumi.g00009227

Gene Model ID

Phfumi.CG.MTP2014.S14611.g09227

Location

S14611:1041..4067

Transcript Models and Sequences

  Phfumi.CG.MTP2014.S14611.g09227.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Autophagy-rel_prot_3_C Pfam Autophagy-related protein 3, C-terminal
Autophagy-rel_prot_3_N Pfam Autophagy-related protein 3, N-terminal
Autophagy-rel_prot_3 Pfam Autophagy-related protein 3

GOSlim

17 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
intracellular Blast cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
cellular protein modification process Orthology biological process
protein targeting to membrane Orthology biological process
protein transport Orthology biological process
protein ubiquitination Orthology biological process
transferase activity Orthology molecular function
ubiquitin-like protein transferase activity Orthology molecular function
enzyme binding Orthology molecular function
ligase activity Orthology molecular function
peptidase activity, acting on L-amino acid peptides Orthology molecular function
cytoplasmic part Orthology cellular component
macromolecular complex Orthology cellular component
organelle organization Orthology biological process
apoptotic process Orthology biological process

GO (Orthology)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
autophagosome assembly Hs biological process
cytoplasmic ubiquitin ligase complex Hs cellular component
autophagy of mitochondrion Hs biological process
protein binding Hs molecular function
cytoplasm Hs cellular component
cytosol Hs cellular component
cellular protein modification process Hs biological process
protein targeting to membrane Hs biological process
autophagy Hs biological process
protein transport Hs biological process
macroautophagy Hs biological process
protein ubiquitination Hs biological process
transferase activity Hs molecular function
Atg8 ligase activity Hs molecular function
Atg12 transferase activity Hs molecular function
ubiquitin-like protein transferase activity Hs molecular function
enzyme binding Hs molecular function
mitochondrial fragmentation involved in apoptotic process Hs biological process
autophagy of nucleus Hs biological process
regulation of cilium assembly Hs biological process

GO (Blast)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
cytoplasmic ubiquitin ligase complex Hs cellular component 332 4.00e-115
protein binding Hs molecular function 332 4.00e-115
intracellular Hs cellular component 47.4 2.21e-06
cytoplasm Hs cellular component 332 4.00e-115
cytosol Hs cellular component 332 4.00e-115
transferase activity Hs molecular function 332 4.00e-115
Atg8 ligase activity Hs molecular function 332 4.00e-115
Atg12 transferase activity Hs molecular function 332 4.00e-115
ubiquitin-like protein transferase activity Hs molecular function 332 4.00e-115
enzyme binding Hs molecular function 332 4.00e-115

GO (InterProScan)

No result

GO Term Analysis Type e-value