- Gene 'Phfumi.CG.MTP2014.S1...'
Gene Card
Best human hits
NLE1; TAF5L; WDR12
Species
Unique Gene ID
Phfumi.g00003655
Gene Model ID
Phfumi.CG.MTP2014.S1386.g03655
Location
S1386:507..6019
Transcript Models and Sequences
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
9 results
| IPR Term | Analysis | Definition |
|---|---|---|
| WD40_repeat_CS | ProSitePatterns | WD40 repeat, conserved site |
| WD40/YVTN_repeat-like_dom_sf | Gene3D | WD40/YVTN repeat-like-containing domain superfamily |
| WD40_repeat_dom_sf | SUPERFAMILY | WD40-repeat-containing domain superfamily |
| NLE | Pfam | NLE |
| WD40_repeat | Pfam | WD40 repeat |
| WD40_repeat | ProSiteProfiles | WD40 repeat |
| G-protein_beta_WD-40_rep | PRINTS | G-protein beta WD-40 repeat |
| WD40_repeat | SMART | WD40 repeat |
| WD40_repeat_dom | ProSiteProfiles | WD40-repeat-containing domain |
GOSlim
19 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| transcription factor activity, sequence-specific DNA binding | Blast | molecular function |
| transcription coactivator activity | Blast | molecular function |
| protein binding | Orthology | molecular function |
| nucleus | Orthology | cellular component |
| nucleoplasm | Orthology | cellular component |
| nucleolus | Orthology | cellular component |
| ribosome | Blast | cellular component |
| Notch signaling pathway | Orthology | biological process |
| cell proliferation | Orthology | biological process |
| nuclear speck | Blast | cellular component |
| RNA processing | Orthology | biological process |
| macromolecular complex | Orthology | cellular component |
| macromolecular complex binding | Orthology | molecular function |
| organelle organization | Blast | biological process |
| transferase activity | Blast | molecular function |
| cellular protein modification process | Blast | biological process |
| nucleoplasm part | Blast | cellular component |
| cytoplasmic part | Blast | cellular component |
| intracellular non-membrane-bounded organelle | Blast | cellular component |
GO (Orthology)
14 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Hs | biological process |
| maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Hs | biological process |
| protein binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| nucleoplasm | Hs | cellular component |
| nucleolus | Hs | cellular component |
| rRNA processing | Hs | biological process |
| Notch signaling pathway | Hs | biological process |
| cell proliferation | Hs | biological process |
| preribosome, large subunit precursor | Hs | cellular component |
| ribosome biogenesis | Hs | biological process |
| ribosomal large subunit biogenesis | Hs | biological process |
| ribonucleoprotein complex binding | Hs | molecular function |
| PeBoW complex | Hs | cellular component |
GO (Blast)
15 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| transcription factor activity, sequence-specific DNA binding | Hs | molecular function | 68.2 | 1.10e-12 |
| transcription coactivator activity | Hs | molecular function | 68.2 | 1.10e-12 |
| histone acetyltransferase activity | Hs | molecular function | 68.2 | 1.10e-12 |
| protein binding | Hs | molecular function | 220 | 3.72e-69 |
| nucleus | Hs | cellular component | 220 | 3.72e-69 |
| nucleoplasm | Hs | cellular component | 220 | 3.72e-69 |
| nucleolus | Hs | cellular component | 220 | 3.72e-69 |
| ribosome | Hs | cellular component | 68.2 | 9.20e-13 |
| nuclear speck | Hs | cellular component | 68.2 | 1.10e-12 |
| preribosome, large subunit precursor | Hs | cellular component | 220 | 3.72e-69 |
| STAGA complex | Hs | cellular component | 68.2 | 1.10e-12 |
| transcription factor TFTC complex | Hs | cellular component | 68.2 | 1.10e-12 |
| cytoplasmic ribonucleoprotein granule | Hs | cellular component | 68.2 | 1.10e-12 |
| ribonucleoprotein complex binding | Hs | molecular function | 220 | 3.72e-69 |
| PeBoW complex | Hs | cellular component | 220 | 3.72e-69 |
GO (InterProScan)
1 result
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| protein binding | Gene3D | molecular function | 2.0E-43 |
