Aniseed - Gene card

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
SDR_fam	PRINTS	Short-chain dehydrogenase/reductase SDR
SDR_fam	Pfam	Short-chain dehydrogenase/reductase SDR
HotDog_dom_sf	SUPERFAMILY	HotDog domain superfamily
NAD(P)-bd_dom_sf	SUPERFAMILY	NAD(P)-binding domain superfamily
Sc_DH/Rdtase_CS	ProSitePatterns	Short-chain dehydrogenase/reductase, conserved site

GOSlim

20 results

GO Term	Annotation Origin	Type
receptor binding	Orthology	molecular function
protein binding	Blast	molecular function
mitochondrion	Orthology	cellular component
mitochondrial matrix	Blast	cellular component
peroxisome	Orthology	cellular component
membrane	Orthology	cellular component
protein homodimerization activity	Orthology	molecular function
oxidation-reduction process	Orthology	biological process
cellular metabolic process	Orthology	biological process
organic substance metabolic process	Orthology	biological process
cell differentiation	Orthology	biological process
catalytic activity	Orthology	molecular function
intracellular organelle part	Orthology	cellular component
whole membrane	Orthology	cellular component
bounding membrane of organelle	Orthology	cellular component
intracellular organelle lumen	Orthology	cellular component
cellular biosynthetic process	Orthology	biological process
anion binding	Blast	molecular function
nucleotide binding	Blast	molecular function
coenzyme binding	Blast	molecular function

GO (Orthology)

24 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
very long-chain fatty acid metabolic process	Hs	biological process
osteoblast differentiation	Hs	biological process
3-hydroxyacyl-CoA dehydrogenase activity	Hs	molecular function
receptor binding	Hs	molecular function
mitochondrion	Hs	cellular component
peroxisome	Hs	cellular component
peroxisomal membrane	Hs	cellular component
peroxisomal matrix	Hs	cellular component
lipid metabolic process	Hs	biological process
fatty acid metabolic process	Hs	biological process
fatty acid beta-oxidation	Hs	biological process
bile acid biosynthetic process	Hs	biological process
androgen metabolic process	Hs	biological process
estrogen metabolic process	Hs	biological process
membrane	Hs	cellular component
oxidoreductase activity	Hs	molecular function
long-chain-enoyl-CoA hydratase activity	Hs	molecular function
lyase activity	Hs	molecular function
isomerase activity	Hs	molecular function
fatty acid beta-oxidation using acyl-CoA oxidase	Hs	biological process
3alpha,7alpha,12alpha-trihydroxy-5beta-cholest-24-enoyl-CoA hydratase activity	Hs	molecular function
protein homodimerization activity	Hs	molecular function
17-beta-hydroxysteroid dehydrogenase (NAD+) activity	Hs	molecular function
oxidation-reduction process	Hs	biological process

GO (Blast)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
3-hydroxyacyl-CoA dehydrogenase activity	Hs	molecular function	435	2.44e-146
estradiol 17-beta-dehydrogenase activity	Hs	molecular function	97.8	4.41e-23
receptor binding	Hs	molecular function	435	2.44e-146
protein binding	Hs	molecular function	97.8	4.41e-23
mitochondrion	Hs	cellular component	435	2.44e-146
mitochondrial matrix	Hs	cellular component	97.8	4.41e-23
peroxisome	Hs	cellular component	435	2.44e-146
peroxisomal membrane	Hs	cellular component	435	2.44e-146
peroxisomal matrix	Hs	cellular component	435	2.44e-146
membrane	Hs	cellular component	435	2.44e-146
oxidoreductase activity	Hs	molecular function	435	2.44e-146
long-chain-enoyl-CoA hydratase activity	Hs	molecular function	435	2.44e-146
lyase activity	Hs	molecular function	435	2.44e-146
isomerase activity	Hs	molecular function	435	2.44e-146
3alpha,7alpha,12alpha-trihydroxy-5beta-cholest-24-enoyl-CoA hydratase activity	Hs	molecular function	435	2.44e-146
protein homodimerization activity	Hs	molecular function	435	2.44e-146
17-beta-hydroxysteroid dehydrogenase (NAD+) activity	Hs	molecular function	435	2.44e-146
3-oxoacyl-[acyl-carrier-protein] reductase (NADH) activity	Hs	molecular function	97.8	4.41e-23
testosterone dehydrogenase (NAD+) activity	Hs	molecular function	97.8	4.41e-23
NADH binding	Hs	molecular function	97.8	4.41e-23

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
oxidoreductase activity	ProSitePatterns	molecular function

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location