Gene Card
Best human hits
PGAM5; SNRPA; SNRPB2
Species
Unique Gene ID
Phfumi.g00008778
Gene Model ID
Phfumi.CG.MTP2014.S11361.g08778
Location
S11361:0..2754
Transcript Models and Sequences
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
9 results
| IPR Term | Analysis | Definition |
|---|---|---|
| His_Pase_superF_clade-1 | Pfam | Histidine phosphatase superfamily, clade-1 |
| Nucleotide-bd_a/b_plait_sf | Gene3D | Nucleotide-binding alpha-beta plait domain superfamily |
| RRM_dom | Pfam | RNA recognition motif domain |
| RRM_dom | ProSiteProfiles | RNA recognition motif domain |
| RRM_dom | SMART | RNA recognition motif domain |
| RBD_domain_sf | SUPERFAMILY | RNA-binding domain superfamily |
| His_PPase_superfam | SUPERFAMILY | Histidine phosphatase superfamily |
| His_Pase_superF_clade-1 | CDD | Histidine phosphatase superfamily, clade-1 |
| His_PPase_superfam | Gene3D | Histidine phosphatase superfamily |
GOSlim
21 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nucleic acid binding | Blast | molecular function |
| RNA binding | Blast | molecular function |
| GTPase activator activity | Blast | molecular function |
| protein binding | Blast | molecular function |
| nucleus | Blast | cellular component |
| nucleoplasm | Blast | cellular component |
| mitochondrion | Blast | cellular component |
| protein dephosphorylation | Blast | biological process |
| membrane | Blast | cellular component |
| integral component of membrane | Blast | cellular component |
| dephosphorylation | Blast | biological process |
| nuclear speck | Blast | cellular component |
| hydrolase activity | Blast | molecular function |
| identical protein binding | Blast | molecular function |
| macromolecular complex binding | Blast | molecular function |
| nucleolus | Blast | cellular component |
| nuclear part | Blast | cellular component |
| macromolecular complex | Blast | cellular component |
| whole membrane | Blast | cellular component |
| mitochondrial membrane | Blast | cellular component |
| bounding membrane of organelle | Blast | cellular component |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
30 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| fibrillar center | Hs | cellular component | 106 | 1.24e-27 |
| nucleic acid binding | Hs | molecular function | 125 | 3.02e-34 |
| RNA binding | Hs | molecular function | 125 | 3.02e-34 |
| phosphoprotein phosphatase activity | Hs | molecular function | 159 | 3.22e-47 |
| protein serine/threonine phosphatase activity | Hs | molecular function | 159 | 3.22e-47 |
| GTPase activator activity | Hs | molecular function | 159 | 3.22e-47 |
| protein binding | Hs | molecular function | 159 | 3.22e-47 |
| nucleus | Hs | cellular component | 125 | 3.02e-34 |
| nucleoplasm | Hs | cellular component | 125 | 3.02e-34 |
| spliceosomal complex | Hs | cellular component | 125 | 3.02e-34 |
| U1 snRNP | Hs | cellular component | 125 | 3.02e-34 |
| U2 snRNP | Hs | cellular component | 106 | 1.24e-27 |
| mitochondrion | Hs | cellular component | 159 | 3.22e-47 |
| mitochondrial outer membrane | Hs | cellular component | 159 | 3.22e-47 |
| signal transducer, downstream of receptor, with serine/threonine phosphatase activity | Hs | molecular function | 159 | 3.22e-47 |
| membrane | Hs | cellular component | 159 | 3.22e-47 |
| integral component of membrane | Hs | cellular component | 159 | 3.22e-47 |
| nuclear speck | Hs | cellular component | 106 | 1.24e-27 |
| hydrolase activity | Hs | molecular function | 159 | 3.22e-47 |
| phosphatase activity | Hs | molecular function | 159 | 3.22e-47 |
| intracellular ribonucleoprotein complex | Hs | cellular component | 125 | 3.02e-34 |
| small nuclear ribonucleoprotein complex | Hs | cellular component | 106 | 1.24e-27 |
| U1 snRNA binding | Hs | molecular function | 125 | 3.02e-34 |
| snRNA stem-loop binding | Hs | molecular function | 125 | 3.02e-34 |
| identical protein binding | Hs | molecular function | 125 | 3.02e-34 |
| macromolecular complex binding | Hs | molecular function | 159 | 3.22e-47 |
| snRNP binding | Hs | molecular function | 106 | 1.24e-27 |
| U2-type catalytic step 2 spliceosome | Hs | cellular component | 106 | 1.24e-27 |
| catalytic step 2 spliceosome | Hs | cellular component | 106 | 1.24e-27 |
| U1 snRNP binding | Hs | molecular function | 125 | 3.02e-34 |
GO (InterProScan)
1 result
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | SUPERFAMILY | molecular function | 6.79E-13 |
