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GENE CARD

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  1. Gene 'Moocul.CG.ELv1_2.S23...' > 
  2. > 
  3. Pub 'PMID:21238449' > 

Gene Card

Best human hits

TBX2; TBX4; TBX5

Species

M.oculata

Unique Gene ID

Moocul.g00008615

Gene Model ID

Moocul.CG.ELv1_2.S99115.g08615

Location

S99115:44626..55628

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S99115.g08615.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
TF_T-box ProSiteProfiles Transcription factor, T-box
TF_T-box CDD Transcription factor, T-box
p53-like_TF_DNA-bd SUPERFAMILY p53-like transcription factor, DNA-binding
TF_T-box PRINTS Transcription factor, T-box
TF_T-box SMART Transcription factor, T-box
TF_Brachyury PRINTS Transcription factor, Brachyury
T-box_sf Gene3D T-box superfamily
TF_T-box Pfam Transcription factor, T-box
TF_T-box_CS ProSitePatterns Transcription factor, T-box, conserved site
TF_T-box PANTHER Transcription factor, T-box

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

50 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function
heart looping Hs biological process
heart morphogenesis Hs biological process
outflow tract morphogenesis Hs biological process
endocardial cushion morphogenesis Hs biological process
DNA binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
transcription factor complex Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
Notch signaling pathway Hs biological process
multicellular organism development Hs biological process
muscle cell fate determination Hs biological process
cell aging Hs biological process
regulation of heart contraction Hs biological process
positive regulation of cell proliferation Hs biological process
embryonic heart tube development Hs biological process
limb morphogenesis Hs biological process
atrioventricular canal development Hs biological process
sequence-specific DNA binding Hs molecular function
negative regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription, DNA-templated Hs biological process
embryonic camera-type eye morphogenesis Hs biological process
cardiac muscle tissue development Hs biological process
cardiac muscle cell differentiation Hs biological process
palate development Hs biological process
pharynx development Hs biological process
cellular senescence Hs biological process
RNA polymerase II transcription factor binding Hs molecular function
RNA polymerase II activating transcription factor binding Hs molecular function
skeletal system development Hs biological process
blood vessel development Hs biological process
anterior/posterior axis specification, embryo Hs biological process
animal organ morphogenesis Hs biological process
specification of animal organ position Hs biological process
stem cell population maintenance Hs biological process
male genitalia development Hs biological process
female genitalia development Hs biological process
embryonic hindlimb morphogenesis Hs biological process
regulation of cell proliferation Hs biological process
negative regulation of apoptotic process Hs biological process
positive regulation of cell cycle Hs biological process
mesoderm morphogenesis Hs biological process
positive regulation of stem cell proliferation Hs biological process

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 251 4.26e-75
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 363 1.19e-115
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 363 1.19e-115
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 363 1.19e-115
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 251 4.26e-75
DNA binding Hs molecular function 363 1.19e-115
transcription factor activity, sequence-specific DNA binding Hs molecular function 363 1.19e-115
protein binding Hs molecular function 363 1.19e-115
nucleus Hs cellular component 363 1.19e-115
nucleoplasm Hs cellular component 251 4.26e-75
transcription factor complex Hs cellular component 363 1.19e-115
cytoplasm Hs cellular component 251 4.26e-75
transcription factor binding Hs molecular function 251 4.26e-75
macromolecular complex Hs cellular component 251 4.26e-75
protein-DNA complex Hs cellular component 251 4.26e-75
sequence-specific DNA binding Hs molecular function 363 1.19e-115

GO (InterProScan)

3 results

GO Term Analysis Type e-value
transcription factor activity, sequence-specific DNA binding PANTHER molecular function 2.9E-149
nucleus PANTHER cellular component 2.9E-149
regulation of transcription, DNA-templated PANTHER biological process 2.9E-149

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