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GENE CARD

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  1. Gene 'Moocul.CG.ELv1_2.S94...'

Gene Card

Best human hits

BOP1; SLC35F1; SLC35F2

Species

M.oculata

Unique Gene ID

Moocul.g00007730

Gene Model ID

Moocul.CG.ELv1_2.S94195.g07730

Location

S94195:13442..24855

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S94195.g07730.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

13 results

IPR Term Analysis Definition
WD40_repeat_dom ProSiteProfiles WD40-repeat-containing domain
WD40_repeat_dom_sf SUPERFAMILY WD40-repeat-containing domain superfamily
WD40_repeat Pfam WD40 repeat
WD40/YVTN_repeat-like_dom_sf Gene3D WD40/YVTN repeat-like-containing domain superfamily
BOP1/Erb1 PANTHER WD repeat BOP1/Erb1
BOP1_N_dom Pfam BOP1, N-terminal domain
BOP1_N_dom SMART BOP1, N-terminal domain
WD40_repeat SMART WD40 repeat
MFS_dom CDD Major facilitator superfamily domain
WD40_repeat ProSiteProfiles WD40 repeat
SLC35_F1/F2/F6 Pfam Solute carrier family 35 member SLC35F1/F2/F6
BOP1/Erb1 Hamap WD repeat BOP1/Erb1
WD40_repeat_CS ProSitePatterns WD40 repeat, conserved site

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
ribosomal large subunit assembly Hs biological process
cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Hs biological process
maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Hs biological process
RNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
nucleolus Hs cellular component
rRNA processing Hs biological process
cell proliferation Hs biological process
intracellular ribonucleoprotein complex Hs cellular component
preribosome, large subunit precursor Hs cellular component
ribosome biogenesis Hs biological process
ribosomal large subunit biogenesis Hs biological process
ribonucleoprotein complex binding Hs molecular function
regulation of cell cycle Hs biological process
PeBoW complex Hs cellular component

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 827 0.0
protein binding Hs molecular function 827 0.0
nucleus Hs cellular component 827 0.0
nucleoplasm Hs cellular component 827 0.0
nucleolus Hs cellular component 827 0.0
membrane Hs cellular component 281 8.37e-85
integral component of membrane Hs cellular component 281 8.37e-85
transmembrane transporter activity Hs molecular function 281 8.37e-85
intracellular ribonucleoprotein complex Hs cellular component 827 0.0
preribosome, large subunit precursor Hs cellular component 827 0.0
ribonucleoprotein complex binding Hs molecular function 827 0.0
PeBoW complex Hs cellular component 827 0.0

GO (InterProScan)

6 results

GO Term Analysis Type e-value
protein binding Gene3D molecular function 4.1E-152
rRNA processing SMART biological process 1.6E-145
integral component of membrane Pfam cellular component 3.4E-94
transmembrane transporter activity Pfam molecular function 3.4E-94
ribosome biogenesis PANTHER biological process 0.0
transmembrane transport Pfam biological process 3.4E-94