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Gene Card

Best human hits

NHP2; RPL7A; SNU13

Species

M.oculata

Unique Gene ID

Moocul.g00007506

Gene Model ID

Moocul.CG.ELv1_2.S93126.g07506

Location

S93126:29546..29933

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S93126.g07506.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
L30e-like SUPERFAMILY 50S ribosomal protein L30e-like
Ribosomal_L7Ae/L8/Nhp2 PRINTS Ribosomal protein L7Ae/L8/Nhp2 family
Ribosomal_L7Ae/L30e/S12e/Gad45 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45
H/ACA_rnp_Nhp2_euk PRINTS H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote
L30e-like Gene3D 50S ribosomal protein L30e-like

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

30 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
mRNA splicing, via spliceosome Hs biological process
maturation of LSU-rRNA Hs biological process
box C/D snoRNP assembly Hs biological process
dense fibrillar component Hs cellular component
RNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
spliceosomal complex Hs cellular component
U4atac snRNP Hs cellular component
nucleolus Hs cellular component
rRNA processing Hs biological process
mRNA processing Hs biological process
single fertilization Hs biological process
RNA splicing Hs biological process
maturation of SSU-rRNA Hs biological process
snoRNA binding Hs molecular function
intracellular ribonucleoprotein complex Hs cellular component
U4 snRNA binding Hs molecular function
U4atac snRNA binding Hs molecular function
box C/D snoRNP complex Hs cellular component
small-subunit processome Hs cellular component
macromolecular complex Hs cellular component
U3 snoRNA binding Hs molecular function
box C/D snoRNA binding Hs molecular function
ribosome biogenesis Hs biological process
U4/U6 x U5 tri-snRNP complex Hs cellular component
ATPase binding Hs molecular function
U2-type precatalytic spliceosome Hs cellular component
precatalytic spliceosome Hs cellular component

GO (Blast)

40 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nuclear chromosome, telomeric region Hs cellular component 90.9 2.38e-24
dense fibrillar component Hs cellular component 196 2.25e-66
RNA binding Hs molecular function 196 2.25e-66
structural constituent of ribosome Hs molecular function 48.1 1.89e-07
protein binding Hs molecular function 196 2.25e-66
nucleus Hs cellular component 196 2.25e-66
nucleoplasm Hs cellular component 196 2.25e-66
spliceosomal complex Hs cellular component 196 2.25e-66
U4atac snRNP Hs cellular component 196 2.25e-66
telomerase holoenzyme complex Hs cellular component 90.9 2.38e-24
nucleolus Hs cellular component 196 2.25e-66
small nucleolar ribonucleoprotein complex Hs cellular component 90.9 2.38e-24
cytoplasm Hs cellular component 48.1 1.89e-07
cytosol Hs cellular component 48.1 1.89e-07
ribosome Hs cellular component 48.1 1.89e-07
focal adhesion Hs cellular component 48.1 1.89e-07
Cajal body Hs cellular component 90.9 2.38e-24
membrane Hs cellular component 48.1 1.89e-07
cytosolic large ribosomal subunit Hs cellular component 48.1 1.89e-07
snoRNA binding Hs molecular function 196 2.25e-66
intracellular ribonucleoprotein complex Hs cellular component 196 2.25e-66
U4 snRNA binding Hs molecular function 196 2.25e-66
U4atac snRNA binding Hs molecular function 196 2.25e-66
box C/D snoRNP complex Hs cellular component 196 2.25e-66
box H/ACA snoRNP complex Hs cellular component 90.9 2.38e-24
small-subunit processome Hs cellular component 196 2.25e-66
macromolecular complex Hs cellular component 196 2.25e-66
U3 snoRNA binding Hs molecular function 196 2.25e-66
box C/D snoRNA binding Hs molecular function 196 2.25e-66
box H/ACA snoRNA binding Hs molecular function 90.9 2.38e-24
polysomal ribosome Hs cellular component 48.1 1.89e-07
cadherin binding Hs molecular function 48.1 1.89e-07
U4/U6 x U5 tri-snRNP complex Hs cellular component 196 2.25e-66
ATPase binding Hs molecular function 196 2.25e-66
telomerase RNA binding Hs molecular function 90.9 2.38e-24
extracellular exosome Hs cellular component 48.1 1.89e-07
U2-type precatalytic spliceosome Hs cellular component 196 2.25e-66
precatalytic spliceosome Hs cellular component 196 2.25e-66
box H/ACA scaRNP complex Hs cellular component 90.9 2.38e-24
box H/ACA telomerase RNP complex Hs cellular component 90.9 2.38e-24

GO (InterProScan)

2 results

GO Term Analysis Type e-value
RNA binding PRINTS molecular function 4.7E-27
nucleolus PRINTS cellular component 4.7E-27

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