Aniseed - Gene card

Gene Card

Best human hits

DHX16; DHX36; DHX37

Species

M.oculata

Unique Gene ID

Moocul.g00007271

Gene Model ID

Moocul.CG.ELv1_2.S91537.g07271

Location

S91537:32105..40100

Transcript Models and Sequences

Moocul.CG.ELv1_2.S91537.g07271.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term	Analysis	Definition
Helicase_ATP-bd	ProSiteProfiles	Helicase superfamily 1/2, ATP-binding domain
DEAD/DEAH_box_helicase_dom	Pfam	DEAD/DEAH box helicase domain
DNA/RNA_helicase_DEAH_CS	ProSitePatterns	DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
Helicase_C	SMART	Helicase, C-terminal
DUF1605	Pfam	Domain of unknown function DUF1605
Helicase_ATP-bd	SMART	Helicase superfamily 1/2, ATP-binding domain
Helicase_C	ProSiteProfiles	Helicase, C-terminal
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase
Helicase-assoc_dom	SMART	Helicase-associated domain
Helicase-assoc_dom	Pfam	Helicase-associated domain
Helicase_C	Pfam	Helicase, C-terminal

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

12 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
nucleic acid binding	Hs	molecular function
RNA binding	Hs	molecular function
ATP-dependent RNA helicase activity	Hs	molecular function
helicase activity	Hs	molecular function
ATP binding	Hs	molecular function
nucleoplasm	Hs	cellular component
nucleolus	Hs	cellular component
cytoplasm	Hs	cellular component
rRNA processing	Hs	biological process
RNA processing	Hs	biological process
hydrolase activity	Hs	molecular function

GO (Blast)

28 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	956	0.0
chromosome, telomeric region	Hs	cellular component	218	2.63e-58
core promoter binding	Hs	molecular function	218	2.63e-58
G-quadruplex RNA binding	Hs	molecular function	218	2.63e-58
nucleic acid binding	Hs	molecular function	956	0.0
DNA binding	Hs	molecular function	218	2.63e-58
single-stranded DNA binding	Hs	molecular function	218	2.63e-58
RNA binding	Hs	molecular function	956	0.0
double-stranded RNA binding	Hs	molecular function	218	2.63e-58
ATP-dependent RNA helicase activity	Hs	molecular function	956	0.0
helicase activity	Hs	molecular function	956	0.0
protein binding	Hs	molecular function	218	2.63e-58
ATP binding	Hs	molecular function	956	0.0
nucleus	Hs	cellular component	218	2.63e-58
nucleoplasm	Hs	cellular component	956	0.0
chromosome	Hs	cellular component	218	2.63e-58
nucleolus	Hs	cellular component	956	0.0
cytoplasm	Hs	cellular component	956	0.0
cytosol	Hs	cellular component	218	2.63e-58
DNA-dependent ATPase activity	Hs	molecular function	218	2.63e-58
membrane	Hs	cellular component	218	2.63e-58
integral component of membrane	Hs	cellular component	218	2.63e-58
hydrolase activity	Hs	molecular function	956	0.0
histone deacetylase binding	Hs	molecular function	218	2.63e-58
transcription regulatory region DNA binding	Hs	molecular function	218	2.63e-58
G-quadruplex DNA binding	Hs	molecular function	218	2.63e-58
telomerase RNA binding	Hs	molecular function	218	2.63e-58
extracellular exosome	Hs	cellular component	218	2.63e-58

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
nucleic acid binding	Pfam	molecular function	1.0E-10
helicase activity	SMART	molecular function	1.9E-19
ATP binding	Pfam	molecular function	1.0E-10