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Gene Card

Best human hits

CNOT7; CNOT8

Species

M.oculata

Unique Gene ID

Moocul.g00006575

Gene Model ID

Moocul.CG.ELv1_2.S85954.g06575

Location

S85954:2285..8529

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S85954.g06575.01.t
Moocul.CG.ELv1_2.S85954.g06575.02.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
KTI12/PSTK Pfam Protein KTI12/L-seryl-tRNA(Sec) kinase
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
RNaseH-like_sf SUPERFAMILY Ribonuclease H-like superfamily
RNaseH_sf Gene3D Ribonuclease H superfamily
RNase_CAF1 Pfam Ribonuclease CAF1

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

50 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
3'-5'-exoribonuclease activity Hs molecular function
nuclear-transcribed mRNA poly(A) tail shortening Hs biological process
deadenylation-dependent decapping of nuclear-transcribed mRNA Hs biological process
P-body Hs cellular component
transcriptional repressor activity, RNA polymerase II transcription factor binding Hs molecular function
nucleic acid binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
RNA binding Hs molecular function
nuclease activity Hs molecular function
exonuclease activity Hs molecular function
exoribonuclease activity Hs molecular function
poly(A)-specific ribonuclease activity Hs molecular function
signal transducer activity Hs molecular function
protein binding Hs molecular function
intracellular Hs cellular component
nucleus Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
carbohydrate metabolic process Hs biological process
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of translation Hs biological process
signal transduction Hs biological process
transcription factor binding Hs molecular function
positive regulation of cell proliferation Hs biological process
negative regulation of cell proliferation Hs biological process
negative regulation of gene expression Hs biological process
membrane Hs cellular component
nuclear body Hs cellular component
nuclear speck Hs cellular component
hydrolase activity Hs molecular function
CCR4-NOT complex Hs cellular component
CCR4-NOT core complex Hs cellular component
gene silencing by RNA Hs biological process
cytoplasmic mRNA processing body assembly Hs biological process
gene silencing by miRNA Hs biological process
regulation of tyrosine phosphorylation of STAT protein Hs biological process
exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay Hs biological process
negative regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
metal ion binding Hs molecular function
defense response to virus Hs biological process
positive regulation of nuclear-transcribed mRNA poly(A) tail shortening Hs biological process
negative regulation of type I interferon-mediated signaling pathway Hs biological process
positive regulation of mRNA catabolic process Hs biological process
host cell PML body Hs cellular component
nucleic acid phosphodiester bond hydrolysis Hs biological process
RNA phosphodiester bond hydrolysis, exonucleolytic Hs biological process
positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay Hs biological process

GO (Blast)

25 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
3'-5'-exoribonuclease activity Hs molecular function 427 7.81e-153
P-body Hs cellular component 427 7.81e-153
transcriptional repressor activity, RNA polymerase II transcription factor binding Hs molecular function 427 7.81e-153
nucleic acid binding Hs molecular function 427 7.81e-153
transcription factor activity, sequence-specific DNA binding Hs molecular function 427 7.81e-153
RNA binding Hs molecular function 427 7.81e-153
nuclease activity Hs molecular function 427 7.81e-153
exonuclease activity Hs molecular function 427 7.81e-153
exoribonuclease activity Hs molecular function 427 7.81e-153
poly(A)-specific ribonuclease activity Hs molecular function 427 7.81e-153
signal transducer activity Hs molecular function 427 7.81e-153
protein binding Hs molecular function 427 7.81e-153
intracellular Hs cellular component 406 3.20e-144
nucleus Hs cellular component 427 7.81e-153
cytoplasm Hs cellular component 427 7.81e-153
cytosol Hs cellular component 427 7.81e-153
transcription factor binding Hs molecular function 427 7.81e-153
membrane Hs cellular component 427 7.81e-153
nuclear body Hs cellular component 427 7.81e-153
nuclear speck Hs cellular component 427 7.81e-153
hydrolase activity Hs molecular function 427 7.81e-153
CCR4-NOT complex Hs cellular component 427 7.81e-153
CCR4-NOT core complex Hs cellular component 427 7.81e-153
metal ion binding Hs molecular function 427 7.81e-153
host cell PML body Hs cellular component 427 7.81e-153

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding Gene3D molecular function 2.0E-120

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