Aniseed - Gene card

Gene 'Moocul.CG.ELv1_2.S77...'

Gene Card

Best human hits

SDHB

Species

M.oculata

Unique Gene ID

Moocul.g00005579

Gene Model ID

Moocul.CG.ELv1_2.S77447.g05579

Location

S77447:147586..148015

Transcript Models and Sequences

Moocul.CG.ELv1_2.S77447.g05579.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
Helical_ferredxn	SUPERFAMILY	Alpha-helical ferredoxin
Helical_ferredxn	Gene3D	Alpha-helical ferredoxin
4Fe4S_Fe-S-bd	ProSiteProfiles	4Fe-4S ferredoxin-type, iron-sulphur binding domain
Succ_DH/fum_Rdtase_Fe-S	TIGRFAM	Succinate dehydrogenase/fumarate reductase iron-sulphur protein
4Fe4S_Fe_S_CS	ProSitePatterns	4Fe-4S ferredoxin, iron-sulphur binding, conserved site

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

25 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
protein binding	Hs	molecular function
nucleoplasm	Hs	cellular component
mitochondrion	Hs	cellular component
mitochondrial inner membrane	Hs	cellular component
mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	Hs	cellular component
plasma membrane	Hs	cellular component
tricarboxylic acid cycle	Hs	biological process
succinate metabolic process	Hs	biological process
succinate dehydrogenase (ubiquinone) activity	Hs	molecular function
electron carrier activity	Hs	molecular function
aerobic respiration	Hs	biological process
membrane	Hs	cellular component
oxidoreductase activity	Hs	molecular function
electron transport chain	Hs	biological process
respiratory electron transport chain	Hs	biological process
mitochondrial membrane	Hs	cellular component
respiratory chain complex II	Hs	cellular component
metal ion binding	Hs	molecular function
ubiquinone binding	Hs	molecular function
iron-sulfur cluster binding	Hs	molecular function
2 iron, 2 sulfur cluster binding	Hs	molecular function
3 iron, 4 sulfur cluster binding	Hs	molecular function
4 iron, 4 sulfur cluster binding	Hs	molecular function
oxidation-reduction process	Hs	biological process
extracellular exosome	Hs	cellular component

GO (Blast)

19 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
protein binding	Hs	molecular function	244	9.27e-83
nucleoplasm	Hs	cellular component	244	9.27e-83
mitochondrion	Hs	cellular component	244	9.27e-83
mitochondrial inner membrane	Hs	cellular component	244	9.27e-83
mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	Hs	cellular component	244	9.27e-83
plasma membrane	Hs	cellular component	244	9.27e-83
succinate dehydrogenase (ubiquinone) activity	Hs	molecular function	244	9.27e-83
electron carrier activity	Hs	molecular function	244	9.27e-83
membrane	Hs	cellular component	244	9.27e-83
oxidoreductase activity	Hs	molecular function	244	9.27e-83
mitochondrial membrane	Hs	cellular component	244	9.27e-83
respiratory chain complex II	Hs	cellular component	244	9.27e-83
metal ion binding	Hs	molecular function	244	9.27e-83
ubiquinone binding	Hs	molecular function	244	9.27e-83
iron-sulfur cluster binding	Hs	molecular function	244	9.27e-83
2 iron, 2 sulfur cluster binding	Hs	molecular function	244	9.27e-83
3 iron, 4 sulfur cluster binding	Hs	molecular function	244	9.27e-83
4 iron, 4 sulfur cluster binding	Hs	molecular function	244	9.27e-83
extracellular exosome	Hs	cellular component	244	9.27e-83

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
tricarboxylic acid cycle	TIGRFAM	biological process	2.6E-48
oxidoreductase activity	TIGRFAM	molecular function	2.6E-48
iron-sulfur cluster binding	Gene3D	molecular function	2.5E-61
oxidation-reduction process	TIGRFAM	biological process	2.6E-48