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GENE CARD

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Gene Card

Best human hits

FBXW7; NLE1; WDR12

Species

M.oculata

Unique Gene ID

Moocul.g00005167

Gene Model ID

Moocul.CG.ELv1_2.S74359.g05167

Location

S74359:139..1423

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S74359.g05167.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term Analysis Definition
WD40_repeat_CS ProSitePatterns WD40 repeat, conserved site
WDR12/Ytm1 Hamap WD repeat WDR12/Ytm1
WD40/YVTN_repeat-like_dom_sf Gene3D WD40/YVTN repeat-like-containing domain superfamily
WD40_repeat ProSiteProfiles WD40 repeat
WD40_repeat_dom ProSiteProfiles WD40-repeat-containing domain
WD40_repeat_dom_sf SUPERFAMILY WD40-repeat-containing domain superfamily
WD40_repeat SMART WD40 repeat
NLE Pfam NLE
Apc4_WD40_dom Pfam Anaphase-promoting complex subunit 4, WD40 domain
G-protein_beta_WD-40_rep PRINTS G-protein beta WD-40 repeat
WD40_repeat Pfam WD40 repeat

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Hs biological process
maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Hs biological process
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
nucleolus Hs cellular component
rRNA processing Hs biological process
Notch signaling pathway Hs biological process
cell proliferation Hs biological process
preribosome, large subunit precursor Hs cellular component
ribosome biogenesis Hs biological process
ribosomal large subunit biogenesis Hs biological process
ribonucleoprotein complex binding Hs molecular function
PeBoW complex Hs cellular component

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
ubiquitin-protein transferase activity Hs molecular function 83.6 3.62e-17
protein binding Hs molecular function 391 3.89e-134
nucleus Hs cellular component 391 3.89e-134
nucleoplasm Hs cellular component 391 3.89e-134
nucleolus Hs cellular component 391 3.89e-134
cytoplasm Hs cellular component 83.6 3.62e-17
cytosol Hs cellular component 83.6 3.62e-17
ribosome Hs cellular component 82.4 7.40e-17
SCF ubiquitin ligase complex Hs cellular component 83.6 3.62e-17
cyclin binding Hs molecular function 83.6 3.62e-17
protein binding, bridging Hs molecular function 83.6 3.62e-17
preribosome, large subunit precursor Hs cellular component 391 3.89e-134
ubiquitin protein ligase binding Hs molecular function 83.6 3.62e-17
identical protein binding Hs molecular function 83.6 3.62e-17
ribonucleoprotein complex binding Hs molecular function 391 3.89e-134
phosphothreonine residue binding Hs molecular function 83.6 3.62e-17
PeBoW complex Hs cellular component 391 3.89e-134
ubiquitin-protein transferase activator activity Hs molecular function 83.6 3.62e-17
Parkin-FBXW7-Cul1 ubiquitin ligase complex Hs cellular component 83.6 3.62e-17

GO (InterProScan)

2 results

GO Term Analysis Type e-value
protein binding Gene3D molecular function 8.6E-70
ribosome biogenesis Hamap biological process 29.973