Login
Help

GENE CARD

Submit your Data

  1. Gene 'Moocul.CG.ELv1_2.S73...'

Gene Card

Best human hits

DDX47; DDX56; DDX6

Species

M.oculata

Unique Gene ID

Moocul.g00005012

Gene Model ID

Moocul.CG.ELv1_2.S73189.g05012

Location

S73189:6149..7967

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S73189.g05012.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
Helicase_C SMART Helicase, C-terminal
Helicase_C CDD Helicase, C-terminal
RNA_helicase_DEAD_Q_motif ProSiteProfiles RNA helicase, DEAD-box type, Q motif
DEAD/DEAH_box_helicase_dom Pfam DEAD/DEAH box helicase domain
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
Helicase_ATP-bd SMART Helicase superfamily 1/2, ATP-binding domain
Helicase_C ProSiteProfiles Helicase, C-terminal
Helicase_C Pfam Helicase, C-terminal
Helicase_ATP-bd ProSiteProfiles Helicase superfamily 1/2, ATP-binding domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
nucleic acid binding Hs molecular function
RNA binding Hs molecular function
ATP-dependent RNA helicase activity Hs molecular function
helicase activity Hs molecular function
ATP binding Hs molecular function
nucleus Hs cellular component
nucleolus Hs cellular component
cytoplasm Hs cellular component
rRNA processing Hs biological process
RNA secondary structure unwinding Hs biological process
positive regulation of neuron projection development Hs biological process
membrane Hs cellular component
hydrolase activity Hs molecular function
ribosome biogenesis Hs biological process

GO (Blast)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 538 0.0
heterochromatin Hs cellular component 185 9.58e-52
P-body Hs cellular component 185 9.58e-52
outer dense fiber Hs cellular component 185 9.58e-52
nucleic acid binding Hs molecular function 538 0.0
RNA binding Hs molecular function 538 0.0
RNA helicase activity Hs molecular function 185 9.58e-52
ATP-dependent RNA helicase activity Hs molecular function 538 0.0
helicase activity Hs molecular function 538 0.0
protein binding Hs molecular function 194 1.47e-55
ATP binding Hs molecular function 538 0.0
nucleus Hs cellular component 538 0.0
nucleoplasm Hs cellular component 194 1.47e-55
nucleolus Hs cellular component 538 0.0
cytoplasm Hs cellular component 538 0.0
mitochondrion Hs cellular component 185 9.58e-52
cytosol Hs cellular component 185 9.58e-52
cytoplasmic stress granule Hs cellular component 185 9.58e-52
membrane Hs cellular component 538 0.0
RISC complex Hs cellular component 185 9.58e-52
hydrolase activity Hs molecular function 538 0.0
protein domain specific binding Hs molecular function 185 9.58e-52
cytoplasmic ribonucleoprotein granule Hs cellular component 185 9.58e-52
P granule Hs cellular component 185 9.58e-52
cadherin binding Hs molecular function 185 9.58e-52
sperm annulus Hs cellular component 185 9.58e-52

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleic acid binding Pfam molecular function 4.3E-36
ATP binding Pfam molecular function 4.3E-36