Login
Help

GENE CARD

Submit your Data

  1. EST 'BW581090'

Gene Card

Best human hits

LRP1; RXFP2; SORL1

Species

M.oculata

Unique Gene ID

Moocul.g00003847

Gene Model ID

Moocul.CG.ELv1_2.S61030.g03847

Location

S61030:11058..15639

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S61030.g03847.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
LDrepeatLR_classA_rpt CDD Low-density lipoprotein (LDL) receptor class A repeat
GPCR_Rhodpsn Pfam G protein-coupled receptor, rhodopsin-like
LDrepeatLR_classA_rpt ProSiteProfiles Low-density lipoprotein (LDL) receptor class A repeat
LDL_receptor-like_sf SUPERFAMILY LDL receptor-like superfamily
LDLR_class-A_CS ProSitePatterns Low-density lipoprotein (LDL) receptor class A, conserved site
TSHR/LHCGR/FSHR PANTHER TSH/LHCG/FSH receptor
LDrepeatLR_classA_rpt SMART Low-density lipoprotein (LDL) receptor class A repeat
LDrepeatLR_classA_rpt Pfam Low-density lipoprotein (LDL) receptor class A repeat
GPCR_Rhodpsn_7TM ProSiteProfiles GPCR, rhodopsin-like, 7TM
LDrepeatLR_classA_rpt PRINTS Low-density lipoprotein (LDL) receptor class A repeat

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

55 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 84.0 3.38e-16
amyloid-beta binding Hs molecular function 84.0 3.38e-16
protease binding Hs molecular function 75.5 1.31e-13
RNA binding Hs molecular function 75.5 1.31e-13
signal transducer activity Hs molecular function 90.9 1.35e-18
receptor activity Hs molecular function 75.5 1.31e-13
transmembrane signaling receptor activity Hs molecular function 84.0 3.38e-16
G-protein coupled receptor activity Hs molecular function 90.9 1.35e-18
low-density lipoprotein receptor activity Hs molecular function 84.0 3.38e-16
scavenger receptor activity Hs molecular function 75.5 1.31e-13
calcium ion binding Hs molecular function 75.5 1.31e-13
protein binding Hs molecular function 90.9 1.35e-18
extracellular region Hs cellular component 84.0 3.38e-16
extracellular space Hs cellular component 84.0 3.38e-16
intracellular Hs cellular component 90.9 1.35e-18
nucleus Hs cellular component 75.5 1.31e-13
nuclear envelope lumen Hs cellular component 84.0 3.38e-16
cytoplasm Hs cellular component 75.5 1.31e-13
lysosomal membrane Hs cellular component 75.5 1.31e-13
endosome Hs cellular component 84.0 3.38e-16
early endosome Hs cellular component 84.0 3.38e-16
endoplasmic reticulum Hs cellular component 84.0 3.38e-16
Golgi apparatus Hs cellular component 84.0 3.38e-16
trans-Golgi network Hs cellular component 84.0 3.38e-16
plasma membrane Hs cellular component 90.9 1.35e-18
integral component of plasma membrane Hs cellular component 84.0 3.38e-16
clathrin-coated pit Hs cellular component 75.5 1.31e-13
focal adhesion Hs cellular component 75.5 1.31e-13
endosome membrane Hs cellular component 84.0 3.38e-16
membrane Hs cellular component 90.9 1.35e-18
integral component of membrane Hs cellular component 90.9 1.35e-18
basolateral plasma membrane Hs cellular component 75.5 1.31e-13
protein-hormone receptor activity Hs molecular function 90.9 1.35e-18
alpha-2 macroglobulin receptor activity Hs molecular function 75.5 1.31e-13
peptide hormone binding Hs molecular function 90.9 1.35e-18
clathrin-coated vesicle Hs cellular component 75.5 1.31e-13
low-density lipoprotein particle binding Hs molecular function 84.0 3.38e-16
apolipoprotein receptor activity Hs molecular function 75.5 1.31e-13
ADP-ribosylation factor binding Hs molecular function 84.0 3.38e-16
dendrite Hs cellular component 75.5 1.31e-13
endocytic vesicle membrane Hs cellular component 75.5 1.31e-13
Golgi cisterna Hs cellular component 84.0 3.38e-16
clathrin heavy chain binding Hs molecular function 75.5 1.31e-13
apolipoprotein binding Hs molecular function 75.5 1.31e-13
low-density lipoprotein particle Hs cellular component 84.0 3.38e-16
lipoprotein transporter activity Hs molecular function 75.5 1.31e-13
neuronal cell body Hs cellular component 75.5 1.31e-13
receptor complex Hs cellular component 75.5 1.31e-13
heparan sulfate proteoglycan binding Hs molecular function 75.5 1.31e-13
macromolecular complex binding Hs molecular function 75.5 1.31e-13
metal ion binding Hs molecular function 75.5 1.31e-13
recycling endosome Hs cellular component 84.0 3.38e-16
extracellular exosome Hs cellular component 84.0 3.38e-16
lipoprotein particle receptor binding Hs molecular function 75.5 1.31e-13
plasma membrane protein complex Hs cellular component 75.5 1.31e-13

GO (InterProScan)

4 results

GO Term Analysis Type e-value
G-protein coupled receptor activity Pfam molecular function 2.3E-6
protein binding PRINTS molecular function 1.5E-18
G-protein coupled receptor signaling pathway Pfam biological process 2.3E-6
integral component of membrane Pfam cellular component 2.3E-6