Aniseed - Gene card

Gene Card

Best human hits

SRP72

Species

M.oculata

Unique Gene ID

Moocul.g00003820

Gene Model ID

Moocul.CG.ELv1_2.S60721.g03820

Location

S60721:9260..17528

Transcript Models and Sequences

Moocul.CG.ELv1_2.S60721.g03820.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
SRP_TPR-like	Pfam	Putative TPR-like repeat
TPR-contain_dom	ProSiteProfiles	Tetratricopeptide repeat-containing domain
TPR-like_helical_dom_sf	Gene3D	Tetratricopeptide-like helical domain superfamily
TPR_repeat	ProSiteProfiles	Tetratricopeptide repeat
TPR_repeat	SMART	Tetratricopeptide repeat
SRP72	PANTHER	Signal recognition particle, SRP72 subunit
TPR-like_helical_dom_sf	SUPERFAMILY	Tetratricopeptide-like helical domain superfamily
SRP72	PIRSF	Signal recognition particle, SRP72 subunit

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

16 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA binding	Hs	molecular function
signal recognition particle binding	Hs	molecular function
protein binding	Hs	molecular function
intracellular	Hs	cellular component
cytoplasm	Hs	cellular component
endoplasmic reticulum	Hs	cellular component
signal recognition particle, endoplasmic reticulum targeting	Hs	cellular component
cytosol	Hs	cellular component
SRP-dependent cotranslational protein targeting to membrane	Hs	biological process
SRP-dependent cotranslational protein targeting to membrane, translocation	Hs	biological process
7S RNA binding	Hs	molecular function
intracellular ribonucleoprotein complex	Hs	cellular component
TPR domain binding	Hs	molecular function
response to drug	Hs	biological process
ribosome binding	Hs	molecular function
signal recognition particle	Hs	cellular component

GO (Blast)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA binding	Hs	molecular function	396	2.01e-130
signal recognition particle binding	Hs	molecular function	396	2.01e-130
protein binding	Hs	molecular function	396	2.01e-130
intracellular	Hs	cellular component	396	2.01e-130
cytoplasm	Hs	cellular component	396	2.01e-130
endoplasmic reticulum	Hs	cellular component	396	2.01e-130
signal recognition particle, endoplasmic reticulum targeting	Hs	cellular component	396	2.01e-130
cytosol	Hs	cellular component	396	2.01e-130
7S RNA binding	Hs	molecular function	396	2.01e-130
intracellular ribonucleoprotein complex	Hs	cellular component	396	2.01e-130
TPR domain binding	Hs	molecular function	396	2.01e-130
ribosome binding	Hs	molecular function	396	2.01e-130
signal recognition particle	Hs	cellular component	396	2.01e-130

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
protein binding	Gene3D	molecular function	4.7E-44
SRP-dependent cotranslational protein targeting to membrane	PANTHER	biological process	3.5E-158