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GENE CARD

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Gene Card

Best human hits

HIP1; TLN1; TLN2

Species

M.oculata

Unique Gene ID

Moocul.g00003794

Gene Model ID

Moocul.CG.ELv1_2.S60205.g03794

Location

S60205:8132..29730

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S60205.g03794.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

20 results

IPR Term Analysis Definition
FERM_central Pfam FERM central domain
I/LWEQ_dom_sf SUPERFAMILY I/LWEQ domain superfamily
Alpha-catenin/vinculin-like_sf SUPERFAMILY Alpha-catenin/vinculin-like superfamily
Talin1/2-RS CDD Talin-1/2, rod-segment
FERM_f0 Pfam Talin, N-terminal F0 domain
Band_41_domain SMART Band 4.1 domain
PH-like_dom_sf Gene3D PH-like domain superfamily
FERM_central CDD FERM central domain
FERM_2 SUPERFAMILY FERM superfamily, second domain
FERM_N Pfam FERM, N-terminal
FERM_CS ProSitePatterns FERM conserved site
ILWEQ_dom Pfam I/LWEQ domain
ILWEQ_dom SMART I/LWEQ domain
FERM/acyl-CoA-bd_prot_sf Gene3D FERM/acyl-CoA-binding protein superfamily
ILWEQ_dom ProDom I/LWEQ domain
Vinculin-bd_dom Pfam Vinculin-binding site-containing domain
Talin_cent Pfam Talin, central
Talin_cent_sf SUPERFAMILY Talin, central domain superfamily
ILWEQ_dom ProSiteProfiles I/LWEQ domain
FERM_domain ProSiteProfiles FERM domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

36 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
ruffle Hs cellular component
phosphatidylserine binding Hs molecular function
platelet degranulation Hs biological process
actin binding Hs molecular function
integrin binding Hs molecular function
structural molecule activity Hs molecular function
structural constituent of cytoskeleton Hs molecular function
protein binding Hs molecular function
extracellular region Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
plasma membrane Hs cellular component
focal adhesion Hs cellular component
muscle contraction Hs biological process
cytoskeletal anchoring at plasma membrane Hs biological process
cell-cell junction assembly Hs biological process
cell-substrate junction assembly Hs biological process
cell adhesion Hs biological process
integrin-mediated signaling pathway Hs biological process
cell surface Hs cellular component
actin cytoskeleton Hs cellular component
membrane Hs cellular component
viral process Hs biological process
vinculin binding Hs molecular function
cell junction Hs cellular component
LIM domain binding Hs molecular function
cortical actin cytoskeleton organization Hs biological process
ruffle membrane Hs cellular component
phosphatidylinositol binding Hs molecular function
cell projection Hs cellular component
synapse Hs cellular component
cadherin binding Hs molecular function
actin filament binding Hs molecular function
extracellular exosome Hs cellular component
platelet aggregation Hs biological process

GO (Blast)

51 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
ruffle Hs cellular component 2808 0.0
phosphatidylserine binding Hs molecular function 2796 0.0
actin binding Hs molecular function 2808 0.0
epidermal growth factor receptor binding Hs molecular function 108 2.01e-23
integrin binding Hs molecular function 2796 0.0
structural molecule activity Hs molecular function 2808 0.0
structural constituent of cytoskeleton Hs molecular function 2808 0.0
protein binding Hs molecular function 2808 0.0
phospholipid binding Hs molecular function 108 2.01e-23
extracellular region Hs cellular component 2796 0.0
nucleus Hs cellular component 108 2.01e-23
cytoplasm Hs cellular component 2808 0.0
Golgi apparatus Hs cellular component 108 2.01e-23
cytosol Hs cellular component 2796 0.0
cytoskeleton Hs cellular component 2808 0.0
plasma membrane Hs cellular component 2808 0.0
focal adhesion Hs cellular component 2808 0.0
cell surface Hs cellular component 2796 0.0
endomembrane system Hs cellular component 108 2.01e-23
actin cytoskeleton Hs cellular component 2808 0.0
membrane Hs cellular component 2808 0.0
vinculin binding Hs molecular function 2796 0.0
cell junction Hs cellular component 2808 0.0
AP-2 adaptor complex Hs cellular component 108 2.01e-23
clathrin-coated vesicle Hs cellular component 108 2.01e-23
LIM domain binding Hs molecular function 2796 0.0
clathrin binding Hs molecular function 108 2.01e-23
clathrin-coated vesicle membrane Hs cellular component 108 2.01e-23
extrinsic component of cytoplasmic side of plasma membrane Hs cellular component 108 2.01e-23
cytoplasmic vesicle Hs cellular component 108 2.01e-23
clathrin light chain binding Hs molecular function 108 2.01e-23
phosphatidylinositol-3-phosphate binding Hs molecular function 108 2.01e-23
ruffle membrane Hs cellular component 2796 0.0
phosphatidylinositol binding Hs molecular function 2796 0.0
glutamate receptor binding Hs molecular function 108 2.01e-23
AP-2 adaptor complex binding Hs molecular function 108 2.01e-23
clathrin adaptor activity Hs molecular function 108 2.01e-23
protein homodimerization activity Hs molecular function 108 2.01e-23
cell projection Hs cellular component 2796 0.0
intracellular membrane-bounded organelle Hs cellular component 108 2.01e-23
phosphatidylinositol-3,4-bisphosphate binding Hs molecular function 108 2.01e-23
synapse Hs cellular component 2808 0.0
cadherin binding Hs molecular function 2796 0.0
protein heterodimerization activity Hs molecular function 108 2.01e-23
actin filament binding Hs molecular function 2808 0.0
extracellular exosome Hs cellular component 2796 0.0
phosphatidylinositol-3,5-bisphosphate binding Hs molecular function 108 2.01e-23
presynapse Hs cellular component 108 2.01e-23
postsynapse Hs cellular component 108 2.01e-23
extrinsic component of presynaptic membrane Hs cellular component 108 2.01e-23
extrinsic component of postsynaptic membrane Hs cellular component 108 2.01e-23

GO (InterProScan)

8 results

GO Term Analysis Type e-value
ruffle Pfam cellular component 2.5E-54
actin binding SMART molecular function 4.2E-83
structural constituent of cytoskeleton Pfam molecular function 2.5E-54
cytoskeleton ProSiteProfiles cellular component 51.33
focal adhesion Pfam cellular component 2.5E-54
cytoskeletal anchoring at plasma membrane Pfam biological process 2.5E-54
cell adhesion SUPERFAMILY biological process 4.39E-37
actin filament binding SUPERFAMILY molecular function 4.39E-37