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GENE CARD

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Gene Card

Best human hits

SIX1; SIX2; SIX4

Species

M.oculata

Unique Gene ID

Moocul.g00003777

Gene Model ID

Moocul.CG.ELv1_2.S60049.g03777

Location

S60049:62010..64392

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S60049.g03777.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
Homeobox_dom CDD Homeobox domain
Homeobox_CS ProSitePatterns Homeobox, conserved site
SIX1 PANTHER Homeobox protein SIX1
SIX1_SD Pfam Homeobox protein SIX1, N-terminal SD domain
Homeobox_dom Pfam Homeobox domain
Homeobox-like_sf SUPERFAMILY Homeobox-like domain superfamily
Homeobox_dom SMART Homeobox domain
Homeobox_dom ProSiteProfiles Homeobox domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 374 4.08e-129
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 374 4.08e-129
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 374 4.08e-129
transcription coactivator binding Hs molecular function 374 4.08e-129
DNA binding Hs molecular function 374 4.08e-129
chromatin binding Hs molecular function 374 4.08e-129
transcription factor activity, sequence-specific DNA binding Hs molecular function 374 4.08e-129
protein binding Hs molecular function 374 4.08e-129
nucleus Hs cellular component 374 4.08e-129
transcription factor complex Hs cellular component 374 4.08e-129
nucleolus Hs cellular component 374 4.08e-129
cytoplasm Hs cellular component 374 4.08e-129
transcription factor binding Hs molecular function 361 4.92e-124
sequence-specific DNA binding Hs molecular function 374 4.08e-129
transcription regulatory region DNA binding Hs molecular function 374 4.08e-129
macromolecular complex binding Hs molecular function 361 4.92e-124

GO (InterProScan)

7 results

GO Term Analysis Type e-value
DNA binding SUPERFAMILY molecular function 1.2E-17
transcription factor activity, sequence-specific DNA binding PANTHER molecular function 2.4E-130
regulation of transcription, DNA-templated ProSitePatterns biological process
apoptotic process PANTHER biological process 2.4E-130
cell proliferation PANTHER biological process 2.4E-130
sequence-specific DNA binding ProSitePatterns molecular function
animal organ development PANTHER biological process 2.4E-130