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GENE CARD

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Gene Card

Best human hits

NVL; SPATA5; VCP

Species

M.oculata

Unique Gene ID

Moocul.g00003169

Gene Model ID

Moocul.CG.ELv1_2.S53701.g03169

Location

S53701:5005..7432

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S53701.g03169.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

12 results

IPR Term Analysis Definition
AAA+_ATPase SMART AAA+ ATPase domain
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
AAA_ATPase_CDC48 TIGRFAM AAA ATPase, CDC48 family
ATPase_AAA_CS ProSitePatterns ATPase, AAA-type, conserved site
Cdc48_dom2 SMART CDC48, domain 2
CDC4_N-term_subdom SMART CDC48, N-terminal subdomain
CDC48_domain_2-like_sf SUPERFAMILY CDC48 domain 2-like superfamily
ATPase_AAA_core Pfam ATPase, AAA-type, core
Asp_de-COase-like_dom_sf SUPERFAMILY Aspartate decarboxylase-like domain superfamily
Cdc48_dom2 Pfam CDC48, domain 2
Vps4_C Pfam Vps4 oligomerisation, C-terminal
CDC4_N-term_subdom Pfam CDC48, N-terminal subdomain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

47 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 1352 0.0
proteasome complex Hs cellular component 1352 0.0
RNA binding Hs molecular function 1352 0.0
receptor binding Hs molecular function 1352 0.0
protein binding Hs molecular function 1352 0.0
ATP binding Hs molecular function 1352 0.0
extracellular region Hs cellular component 1352 0.0
nucleus Hs cellular component 1352 0.0
nucleoplasm Hs cellular component 1352 0.0
telomerase holoenzyme complex Hs cellular component 471 3.42e-154
nucleolus Hs cellular component 471 3.42e-154
cytoplasm Hs cellular component 1352 0.0
mitochondrion Hs cellular component 560 0.0
endoplasmic reticulum Hs cellular component 1352 0.0
endoplasmic reticulum membrane Hs cellular component 1352 0.0
lipid droplet Hs cellular component 1352 0.0
cytosol Hs cellular component 1352 0.0
lipid binding Hs molecular function 1352 0.0
membrane Hs cellular component 471 3.42e-154
hydrolase activity Hs molecular function 1352 0.0
ATPase activity Hs molecular function 1352 0.0
protein phosphatase binding Hs molecular function 1352 0.0
protein domain specific binding Hs molecular function 1352 0.0
polyubiquitin modification-dependent protein binding Hs molecular function 1352 0.0
ubiquitin protein ligase binding Hs molecular function 1352 0.0
macromolecular complex Hs cellular component 1352 0.0
VCP-NPL4-UFD1 AAA ATPase complex Hs cellular component 1352 0.0
secretory granule lumen Hs cellular component 1352 0.0
azurophil granule lumen Hs cellular component 1352 0.0
deubiquitinase activator activity Hs molecular function 1352 0.0
site of double-strand break Hs cellular component 1352 0.0
K48-linked polyubiquitin modification-dependent protein binding Hs molecular function 1352 0.0
Derlin-1 retrotranslocation complex Hs cellular component 1352 0.0
MHC class I protein binding Hs molecular function 1352 0.0
identical protein binding Hs molecular function 1352 0.0
myelin sheath Hs cellular component 1352 0.0
intracellular membrane-bounded organelle Hs cellular component 1352 0.0
ADP binding Hs molecular function 1352 0.0
ubiquitin-like protein ligase binding Hs molecular function 1352 0.0
perinuclear region of cytoplasm Hs cellular component 1352 0.0
extracellular exosome Hs cellular component 1352 0.0
BAT3 complex binding Hs molecular function 1352 0.0
ficolin-1-rich granule lumen Hs cellular component 1352 0.0
ATPase complex Hs cellular component 1352 0.0
preribosome binding Hs molecular function 471 3.42e-154
ubiquitin-specific protease binding Hs molecular function 1352 0.0
VCP-NSFL1C complex Hs cellular component 1352 0.0

GO (InterProScan)

2 results

GO Term Analysis Type e-value
ATP binding Pfam molecular function 1.6E-46
hydrolase activity TIGRFAM molecular function 2.2E-255