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GENE CARD

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Gene Card

Best human hits

CDC40; WDR25; WDR5

Species

M.oculata

Unique Gene ID

Moocul.g00001965

Gene Model ID

Moocul.CG.ELv1_2.S38864.g01965

Location

S38864:37042..46532

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S38864.g01965.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
WD40_repeat_dom_sf SUPERFAMILY WD40-repeat-containing domain superfamily
WD40_repeat Pfam WD40 repeat
WD40_repeat_dom ProSiteProfiles WD40-repeat-containing domain
WD40/YVTN_repeat-like_dom_sf Gene3D WD40/YVTN repeat-like-containing domain superfamily
WD40_repeat ProSiteProfiles WD40 repeat
WD40_repeat SMART WD40 repeat
PRPF17 PANTHER Pre-mRNA-processing factor 17

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
mRNA splicing, via spliceosome Hs biological process
RNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
spliceosomal complex Hs cellular component
termination of RNA polymerase II transcription Hs biological process
mRNA processing Hs biological process
RNA export from nucleus Hs biological process
mRNA export from nucleus Hs biological process
RNA splicing Hs biological process
mRNA 3'-end processing Hs biological process
U2-type catalytic step 2 spliceosome Hs cellular component
catalytic step 2 spliceosome Hs cellular component

GO (Blast)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
histone acetyltransferase complex Hs cellular component 105 8.12e-25
RNA binding Hs molecular function 701 0.0
protein binding Hs molecular function 701 0.0
intracellular Hs cellular component 105 8.12e-25
nucleus Hs cellular component 701 0.0
nucleoplasm Hs cellular component 701 0.0
Ada2/Gcn5/Ada3 transcription activator complex Hs cellular component 105 8.12e-25
spliceosomal complex Hs cellular component 701 0.0
histone-lysine N-methyltransferase activity Hs molecular function 105 8.12e-25
methylated histone binding Hs molecular function 105 8.12e-25
histone methyltransferase complex Hs cellular component 105 8.12e-25
ciliary basal body Hs cellular component 105 8.12e-25
histone methyltransferase activity (H3-K4 specific) Hs molecular function 105 8.12e-25
histone acetyltransferase activity (H4-K5 specific) Hs molecular function 105 8.12e-25
histone acetyltransferase activity (H4-K8 specific) Hs molecular function 105 8.12e-25
MLL3/4 complex Hs cellular component 105 8.12e-25
histone acetyltransferase activity (H4-K16 specific) Hs molecular function 105 8.12e-25
Set1C/COMPASS complex Hs cellular component 105 8.12e-25
U2-type catalytic step 2 spliceosome Hs cellular component 701 0.0
catalytic step 2 spliceosome Hs cellular component 701 0.0
MLL1 complex Hs cellular component 105 8.12e-25

GO (InterProScan)

3 results

GO Term Analysis Type e-value
mRNA splicing, via spliceosome PANTHER biological process 3.0E-233
protein binding Gene3D molecular function 1.1E-77
catalytic step 2 spliceosome PANTHER cellular component 3.0E-233