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GENE CARD

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Gene Card

Best human hits

DHX58; FANCM; IFIH1

Species

M.oculata

Unique Gene ID

Moocul.g00000494

Gene Model ID

Moocul.CG.ELv1_2.S14641.g00494

Location

S14641:8060..24349

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S14641.g00494.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

12 results

IPR Term Analysis Definition
Helicase_C ProSiteProfiles Helicase, C-terminal
Znf_RanBP2 ProSiteProfiles Zinc finger, RanBP2-type
Helicase_C Pfam Helicase, C-terminal
RuvA_2-like SUPERFAMILY RuvA domain 2-like
Znf_RanBP2 ProSitePatterns Zinc finger, RanBP2-type
Restrct_endonuc-II-like SUPERFAMILY Restriction endonuclease type II-like
Znf_RanBP2 SMART Zinc finger, RanBP2-type
Helicase_C SMART Helicase, C-terminal
FANCM-MHF-bd Pfam Fanconi anemia group M protein, MHF binding domain
Znf_RanBP2_sf SUPERFAMILY Zinc finger, RanBP2-type superfamily
Helicase_C CDD Helicase, C-terminal
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
resolution of meiotic recombination intermediates Hs biological process
nucleic acid binding Hs molecular function
DNA binding Hs molecular function
chromatin binding Hs molecular function
helicase activity Hs molecular function
nuclease activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
DNA repair Hs biological process
cellular response to DNA damage stimulus Hs biological process
hydrolase activity Hs molecular function
replication fork processing Hs biological process
interstrand cross-link repair Hs biological process
Fanconi anaemia nuclear complex Hs cellular component
FANCM-MHF complex Hs cellular component
nucleic acid phosphodiester bond hydrolysis Hs biological process

GO (Blast)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 413 4.27e-118
nucleic acid binding Hs molecular function 413 4.27e-118
DNA binding Hs molecular function 413 4.27e-118
chromatin binding Hs molecular function 413 4.27e-118
RNA binding Hs molecular function 58.9 2.16e-08
double-stranded RNA binding Hs molecular function 58.9 2.16e-08
single-stranded RNA binding Hs molecular function 58.9 2.16e-08
helicase activity Hs molecular function 413 4.27e-118
nuclease activity Hs molecular function 413 4.27e-118
protein binding Hs molecular function 413 4.27e-118
ATP binding Hs molecular function 413 4.27e-118
nucleus Hs cellular component 413 4.27e-118
nucleoplasm Hs cellular component 413 4.27e-118
cytoplasm Hs cellular component 58.9 2.16e-08
cytosol Hs cellular component 57.0 9.31e-08
zinc ion binding Hs molecular function 58.9 2.16e-08
hydrolase activity Hs molecular function 413 4.27e-118
identical protein binding Hs molecular function 57.0 9.31e-08
ribonucleoprotein complex binding Hs molecular function 57.0 9.31e-08
Fanconi anaemia nuclear complex Hs cellular component 413 4.27e-118
metal ion binding Hs molecular function 58.9 2.16e-08
FANCM-MHF complex Hs cellular component 413 4.27e-118

GO (InterProScan)

No result

GO Term Analysis Type e-value