Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

NUP50; RANBP2; RGPD1

Species

M.oculata

Unique Gene ID

Moocul.g00014731

Gene Model ID

Moocul.CG.ELv1_2.S126286.g14731

Location

S126286:5185..7909

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S126286.g14731.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
PH-like_dom_sf Gene3D PH-like domain superfamily
Ran_bind_dom Pfam Ran binding domain
Ran_bind_dom ProSiteProfiles Ran binding domain
Ran_bind_dom SMART Ran binding domain
NUP2/50/61 Pfam Nuclear pore complex, NUP2/50/61

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function
nucleus Hs cellular component
nuclear pore Hs cellular component
nucleoplasm Hs cellular component
regulation of glycolytic process Hs biological process
mRNA export from nucleus Hs biological process
tRNA export from nucleus Hs biological process
protein import into nucleus Hs biological process
Ran GTPase binding Hs molecular function
protein transport Hs biological process
membrane Hs cellular component
integral component of membrane Hs cellular component
viral process Hs biological process
protein sumoylation Hs biological process
nuclear membrane Hs cellular component
intracellular membrane-bounded organelle Hs cellular component
host cell Hs cellular component
intracellular transport Hs biological process
mRNA transport Hs biological process
regulation of gene silencing by miRNA Hs biological process

GO (Blast)

25 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 44.7 9.54e-05
peptidyl-prolyl cis-trans isomerase activity Hs molecular function 44.7 9.54e-05
GTPase activator activity Hs molecular function 44.7 9.54e-05
protein binding Hs molecular function 239 2.60e-74
intracellular Hs cellular component 42.7 4.13e-04
nucleus Hs cellular component 239 2.60e-74
nuclear envelope Hs cellular component 44.7 9.54e-05
annulate lamellae Hs cellular component 44.7 9.54e-05
nuclear pore Hs cellular component 239 2.60e-74
nucleoplasm Hs cellular component 239 2.60e-74
cytoplasm Hs cellular component 44.7 9.54e-05
centrosome Hs cellular component 44.7 9.54e-05
cytosol Hs cellular component 44.7 9.54e-05
Ran GTPase binding Hs molecular function 239 2.60e-74
membrane Hs cellular component 239 2.60e-74
integral component of membrane Hs cellular component 239 2.60e-74
transferase activity Hs molecular function 44.7 9.54e-05
SUMO transferase activity Hs molecular function 44.7 9.54e-05
nuclear membrane Hs cellular component 239 2.60e-74
nuclear inclusion body Hs cellular component 44.7 9.54e-05
intracellular membrane-bounded organelle Hs cellular component 239 2.60e-74
host cell Hs cellular component 239 2.60e-74
nuclear pore cytoplasmic filaments Hs cellular component 44.7 9.54e-05
nuclear pore nuclear basket Hs cellular component 44.7 9.54e-05
metal ion binding Hs molecular function 44.7 9.54e-05

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nuclear pore Pfam cellular component 5.6E-20
intracellular transport Pfam biological process 4.6E-14