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GENE CARD

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Gene Card

Best human hits

NR1I2; NR1I3; VDR

Species

M.oculata

Unique Gene ID

Moocul.g00014596

Gene Model ID

Moocul.CG.ELv1_2.S124689.g14596

Location

S124689:1769..9374

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S124689.g14596.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Znf_hrmn_rcpt Pfam Zinc finger, nuclear hormone receptor-type
Znf_hrmn_rcpt ProSitePatterns Zinc finger, nuclear hormone receptor-type
Znf_hrmn_rcpt PRINTS Zinc finger, nuclear hormone receptor-type
Znf_hrmn_rcpt SMART Zinc finger, nuclear hormone receptor-type
Znf_NHR/GATA Gene3D Zinc finger, NHR/GATA-type
Znf_hrmn_rcpt ProSiteProfiles Zinc finger, nuclear hormone receptor-type

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

53 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
cell morphogenesis Hs biological process
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function
skeletal system development Hs biological process
DNA binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
steroid hormone receptor activity Hs molecular function
transcription coactivator activity Hs molecular function
nuclear receptor activity Hs molecular function
androgen receptor activity Hs molecular function
thyroid hormone receptor activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
transcription initiation from RNA polymerase II promoter Hs biological process
xenobiotic metabolic process Hs biological process
calcium ion transport Hs biological process
cellular calcium ion homeostasis Hs biological process
signal transduction Hs biological process
multicellular organism development Hs biological process
drug binding Hs molecular function
steroid metabolic process Hs biological process
zinc ion binding Hs molecular function
negative regulation of cell proliferation Hs biological process
calcitriol receptor activity Hs molecular function
animal organ morphogenesis Hs biological process
positive regulation of gene expression Hs biological process
nuclear body Hs cellular component
androgen receptor signaling pathway Hs biological process
intracellular receptor signaling pathway Hs biological process
lithocholic acid receptor activity Hs molecular function
receptor complex Hs cellular component
steroid hormone mediated signaling pathway Hs biological process
sequence-specific DNA binding Hs molecular function
intermediate filament cytoskeleton Hs cellular component
negative regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
metal ion binding Hs molecular function
retinoid X receptor binding Hs molecular function
intestinal absorption Hs biological process
vitamin D receptor signaling pathway Hs biological process
vitamin D response element binding Hs molecular function
RNA polymerase II transcription factor complex Hs cellular component
calcitriol binding Hs molecular function
lithocholic acid binding Hs molecular function

GO (Blast)

30 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 120 4.60e-32
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 145 3.40e-41
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 120 4.60e-32
DNA binding Hs molecular function 145 3.40e-41
transcription factor activity, sequence-specific DNA binding Hs molecular function 145 3.40e-41
steroid hormone receptor activity Hs molecular function 145 3.40e-41
transcription coactivator activity Hs molecular function 120 4.60e-32
nuclear receptor activity Hs molecular function 145 3.40e-41
androgen receptor activity Hs molecular function 119 6.25e-32
thyroid hormone receptor activity Hs molecular function 120 4.60e-32
protein binding Hs molecular function 145 3.40e-41
nucleus Hs cellular component 145 3.40e-41
nucleoplasm Hs cellular component 145 3.40e-41
cytoplasm Hs cellular component 145 3.40e-41
cytosol Hs cellular component 119 6.25e-32
cytoskeleton Hs cellular component 119 6.25e-32
drug binding Hs molecular function 120 4.60e-32
zinc ion binding Hs molecular function 145 3.40e-41
calcitriol receptor activity Hs molecular function 145 3.40e-41
nuclear body Hs cellular component 120 4.60e-32
lithocholic acid receptor activity Hs molecular function 145 3.40e-41
receptor complex Hs cellular component 145 3.40e-41
sequence-specific DNA binding Hs molecular function 145 3.40e-41
intermediate filament cytoskeleton Hs cellular component 120 4.60e-32
metal ion binding Hs molecular function 145 3.40e-41
retinoid X receptor binding Hs molecular function 145 3.40e-41
vitamin D response element binding Hs molecular function 145 3.40e-41
RNA polymerase II transcription factor complex Hs cellular component 145 3.40e-41
calcitriol binding Hs molecular function 145 3.40e-41
lithocholic acid binding Hs molecular function 145 3.40e-41

GO (InterProScan)

5 results

GO Term Analysis Type e-value
transcription factor activity, sequence-specific DNA binding SMART molecular function 7.3E-33
nucleus SMART cellular component 7.3E-33
regulation of transcription, DNA-templated SMART biological process 7.3E-33
zinc ion binding SMART molecular function 7.3E-33
sequence-specific DNA binding SMART molecular function 7.3E-33

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