Aniseed - Gene card

Gene Card

Best human hits

POLR1C; POLR2C

Species

M.oculata

Unique Gene ID

Moocul.g00014048

Gene Model ID

Moocul.CG.ELv1_2.S118709.g14048

Location

S118709:4964..12318

Transcript Models and Sequences

Moocul.CG.ELv1_2.S118709.g14048.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
DNA-dir_RNA_pol_insert	Pfam	DNA-directed RNA polymerase, insert domain
DNA-dir_RNA_pol_RpoA/D/Rpb3	SMART	DNA-directed RNA polymerase, RpoA/D/Rpb3-type
DNA-dir_RNA_pol_RpoA/D/Rpb3	Pfam	DNA-directed RNA polymerase, RpoA/D/Rpb3-type
RNAPI/II_AC40	PANTHER	DNA-directed RNA polymerases I and III subunit AC40
RBP11-like	SUPERFAMILY	RNA polymerase, RBP11-like subunit
RNApol_insert_sf	Gene3D	DNA-directed RNA polymerase, insert domain superfamily
RNApol_insert_sf	SUPERFAMILY	DNA-directed RNA polymerase, insert domain superfamily
RNAPI/II_AC40	CDD	DNA-directed RNA polymerases I and III subunit AC40

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

17 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase I activity	Hs	molecular function
RNA polymerase III activity	Hs	molecular function
DNA binding	Hs	molecular function
DNA-directed 5'-3' RNA polymerase activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
DNA-directed RNA polymerase III complex	Hs	cellular component
DNA-directed RNA polymerase I complex	Hs	cellular component
cytosol	Hs	cellular component
transcription, DNA-templated	Hs	biological process
transcription from RNA polymerase I promoter	Hs	biological process
termination of RNA polymerase I transcription	Hs	biological process
transcription from RNA polymerase III promoter	Hs	biological process
positive regulation of type I interferon production	Hs	biological process
positive regulation of gene expression, epigenetic	Hs	biological process
protein dimerization activity	Hs	molecular function

GO (Blast)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase I activity	Hs	molecular function	327	1.45e-111
RNA polymerase II activity	Hs	molecular function	100	1.61e-24
RNA polymerase III activity	Hs	molecular function	327	1.45e-111
DNA binding	Hs	molecular function	327	1.45e-111
DNA-directed 5'-3' RNA polymerase activity	Hs	molecular function	327	1.45e-111
protein binding	Hs	molecular function	327	1.45e-111
nucleus	Hs	cellular component	327	1.45e-111
nucleoplasm	Hs	cellular component	327	1.45e-111
DNA-directed RNA polymerase II, core complex	Hs	cellular component	100	1.61e-24
DNA-directed RNA polymerase III complex	Hs	cellular component	327	1.45e-111
DNA-directed RNA polymerase I complex	Hs	cellular component	327	1.45e-111
cytoplasm	Hs	cellular component	100	1.61e-24
cytosol	Hs	cellular component	327	1.45e-111
microtubule cytoskeleton	Hs	cellular component	100	1.61e-24
protein dimerization activity	Hs	molecular function	327	1.45e-111

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
DNA-directed 5'-3' RNA polymerase activity	SMART	molecular function	3.8E-96
transcription, DNA-templated	SMART	biological process	3.8E-96
protein dimerization activity	SUPERFAMILY	molecular function	2.16E-28