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GENE CARD

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Gene Card

Best human hits

NR5A2; NR6A1; RXRA

Species

M.oculata

Unique Gene ID

Moocul.g00012640

Gene Model ID

Moocul.CG.ELv1_2.S112899.g12640

Location

S112899:60426..69907

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S112899.g12640.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
Nucl_hrmn_rcpt_lig-bd Pfam Nuclear hormone receptor, ligand-binding domain
Znf_hrmn_rcpt Pfam Zinc finger, nuclear hormone receptor-type
Znf_hrmn_rcpt ProSiteProfiles Zinc finger, nuclear hormone receptor-type
Znf_NHR/GATA Gene3D Zinc finger, NHR/GATA-type
Znf_hrmn_rcpt PRINTS Zinc finger, nuclear hormone receptor-type
Nucl_hrmn_rcpt_lig-bd SMART Nuclear hormone receptor, ligand-binding domain
Znf_hrmn_rcpt SMART Zinc finger, nuclear hormone receptor-type
Znf_hrmn_rcpt ProSitePatterns Zinc finger, nuclear hormone receptor-type
NHR_like_dom_sf SUPERFAMILY Nuclear hormone receptor-like domain superfamily
Nuclear_hrmn_rcpt PRINTS Nuclear hormone receptor

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

25 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function
DNA binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
steroid hormone receptor activity Hs molecular function
nuclear receptor activity Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
transcription factor complex Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
transcription from RNA polymerase II promoter Hs biological process
transcription initiation from RNA polymerase II promoter Hs biological process
gamete generation Hs biological process
spermatogenesis Hs biological process
zinc ion binding Hs molecular function
cell proliferation Hs biological process
intracellular steroid hormone receptor signaling pathway Hs biological process
protein homodimerization activity Hs molecular function
steroid hormone mediated signaling pathway Hs biological process
sequence-specific DNA binding Hs molecular function
positive regulation of transcription from RNA polymerase II promoter Hs biological process
metal ion binding Hs molecular function

GO (Blast)

44 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nuclear chromatin Hs cellular component 118 2.19e-28
transcription regulatory region sequence-specific DNA binding Hs molecular function 155 1.95e-40
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 118 2.19e-28
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 473 3.43e-162
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function 155 1.95e-40
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 473 3.43e-162
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 473 3.43e-162
retinoic acid binding Hs molecular function 118 2.19e-28
DNA binding Hs molecular function 473 3.43e-162
chromatin binding Hs molecular function 155 1.95e-40
double-stranded DNA binding Hs molecular function 155 1.95e-40
transcription factor activity, sequence-specific DNA binding Hs molecular function 473 3.43e-162
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function 155 1.95e-40
steroid hormone receptor activity Hs molecular function 473 3.43e-162
retinoic acid receptor activity Hs molecular function 118 2.19e-28
transcription coactivator activity Hs molecular function 118 2.19e-28
nuclear receptor activity Hs molecular function 473 3.43e-162
9-cis retinoic acid receptor activity Hs molecular function 118 2.19e-28
protein binding Hs molecular function 155 1.95e-40
phospholipid binding Hs molecular function 155 1.95e-40
nucleus Hs cellular component 473 3.43e-162
nucleoplasm Hs cellular component 473 3.43e-162
transcription factor complex Hs cellular component 473 3.43e-162
cytoplasm Hs cellular component 155 1.95e-40
transcription factor binding Hs molecular function 118 2.19e-28
zinc ion binding Hs molecular function 473 3.43e-162
lipid binding Hs molecular function 155 1.95e-40
ligand-dependent nuclear receptor binding Hs molecular function 118 2.19e-28
enzyme binding Hs molecular function 118 2.19e-28
chromatin DNA binding Hs molecular function 118 2.19e-28
macromolecular complex Hs cellular component 118 2.19e-28
peptide binding Hs molecular function 118 2.19e-28
protein homodimerization activity Hs molecular function 473 3.43e-162
vitamin D receptor binding Hs molecular function 118 2.19e-28
receptor complex Hs cellular component 118 2.19e-28
sequence-specific DNA binding Hs molecular function 473 3.43e-162
transcription regulatory region DNA binding Hs molecular function 155 1.95e-40
retinoic acid-responsive element binding Hs molecular function 118 2.19e-28
metal ion binding Hs molecular function 473 3.43e-162
protein heterodimerization activity Hs molecular function 118 2.19e-28
DBD domain binding Hs molecular function 118 2.19e-28
LBD domain binding Hs molecular function 118 2.19e-28
vitamin D response element binding Hs molecular function 118 2.19e-28
RNA polymerase II transcription factor complex Hs cellular component 155 1.95e-40

GO (InterProScan)

8 results

GO Term Analysis Type e-value
DNA binding PRINTS molecular function 2.7E-16
transcription factor activity, sequence-specific DNA binding SMART molecular function 1.1E-34
steroid hormone receptor activity PRINTS molecular function 2.7E-16
nucleus SMART cellular component 1.1E-34
regulation of transcription, DNA-templated SMART biological process 1.1E-34
zinc ion binding SMART molecular function 1.1E-34
steroid hormone mediated signaling pathway SMART biological process 3.1E-25
sequence-specific DNA binding SMART molecular function 1.1E-34

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