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GENE CARD

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Gene Card

Best human hits

DDX10; DDX18; DDX31

Species

M.oculata

Unique Gene ID

Moocul.g00011544

Gene Model ID

Moocul.CG.ELv1_2.S110212.g11544

Location

S110212:8016..10483

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S110212.g11544.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term Analysis Definition
Helicase_C CDD Helicase, C-terminal
Helicase_C SMART Helicase, C-terminal
DUF4217 SMART Domain of unknown function DUF4217
Helicase_C Pfam Helicase, C-terminal
Helicase_ATP-bd ProSiteProfiles Helicase superfamily 1/2, ATP-binding domain
Helicase_C ProSiteProfiles Helicase, C-terminal
RNA_helicase_DEAD_Q_motif ProSiteProfiles RNA helicase, DEAD-box type, Q motif
DUF4217 Pfam Domain of unknown function DUF4217
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
DEAD/DEAH_box_helicase_dom Pfam DEAD/DEAH box helicase domain
Helicase_ATP-bd SMART Helicase superfamily 1/2, ATP-binding domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
nucleic acid binding Hs molecular function
RNA binding Hs molecular function
ATP-dependent RNA helicase activity Hs molecular function
helicase activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
nucleus Hs cellular component
nucleolus Hs cellular component
cytoplasm Hs cellular component
Golgi apparatus Hs cellular component
RNA secondary structure unwinding Hs biological process
hydrolase activity Hs molecular function
ribosome biogenesis Hs biological process
intracellular membrane-bounded organelle Hs cellular component

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 491 9.70e-163
nucleic acid binding Hs molecular function 491 9.70e-163
RNA binding Hs molecular function 491 9.70e-163
RNA helicase activity Hs molecular function 254 9.00e-73
ATP-dependent RNA helicase activity Hs molecular function 491 9.70e-163
helicase activity Hs molecular function 491 9.70e-163
protein binding Hs molecular function 491 9.70e-163
ATP binding Hs molecular function 491 9.70e-163
nucleus Hs cellular component 491 9.70e-163
chromosome Hs cellular component 306 9.58e-94
nucleolus Hs cellular component 491 9.70e-163
cytoplasm Hs cellular component 491 9.70e-163
Golgi apparatus Hs cellular component 491 9.70e-163
membrane Hs cellular component 306 9.58e-94
hydrolase activity Hs molecular function 491 9.70e-163
intracellular membrane-bounded organelle Hs cellular component 491 9.70e-163

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleic acid binding Pfam molecular function 2.8E-48
ATP binding Pfam molecular function 2.8E-48