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GENE CARD

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  1. Gene 'Moocul.CG.ELv1_2.S10...'

Gene Card

Best human hits

EXOSC4; EXOSC6; EXOSC8

Species

M.oculata

Unique Gene ID

Moocul.g00010882

Gene Model ID

Moocul.CG.ELv1_2.S108436.g10882

Location

S108436:34841..35564

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S108436.g10882.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Ribosomal_S5_D2-typ_fold SUPERFAMILY Ribosomal protein S5 domain 2-type fold
ExoRNase_PH_dom1 Pfam Exoribonuclease, phosphorolytic domain 1
PNPase/RNase_PH_dom_sf Gene3D PNPase/RNase PH domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nuclear exosome (RNase complex) Hs cellular component
cytoplasmic exosome (RNase complex) Hs cellular component
exosome (RNase complex) Hs cellular component
RNA binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
nucleolus Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
rRNA processing Hs biological process
rRNA catabolic process Hs biological process
rRNA 3'-end processing Hs biological process
nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' Hs biological process
U4 snRNA 3'-end processing Hs biological process
regulation of mRNA stability Hs biological process
exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay Hs biological process
isotype switching Hs biological process
nuclear mRNA surveillance Hs biological process
polyadenylation-dependent snoRNA 3'-end processing Hs biological process

GO (Blast)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
3'-5'-exoribonuclease activity Hs molecular function 62.4 6.30e-12
nuclear exosome (RNase complex) Hs cellular component 110 1.01e-29
cytoplasmic exosome (RNase complex) Hs cellular component 110 1.01e-29
exosome (RNase complex) Hs cellular component 110 1.01e-29
RNA binding Hs molecular function 110 1.01e-29
protein binding Hs molecular function 62.4 6.30e-12
nucleus Hs cellular component 110 1.01e-29
nucleoplasm Hs cellular component 110 1.01e-29
nucleolus Hs cellular component 110 1.01e-29
cytoplasm Hs cellular component 110 1.01e-29
cytosol Hs cellular component 110 1.01e-29
AU-rich element binding Hs molecular function 62.4 6.30e-12
transcriptionally active chromatin Hs cellular component 62.4 6.30e-12
identical protein binding Hs molecular function 44.3 1.08e-05
intermediate filament cytoskeleton Hs cellular component 62.4 6.30e-12

GO (InterProScan)

No result

GO Term Analysis Type e-value