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GENE CARD

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Gene Card

Best human hits

NFX1; NFXL1; ZNFX1

Species

M.oculata

Unique Gene ID

Moocul.g00010673

Gene Model ID

Moocul.CG.ELv1_2.S107769.g10673

Location

S107769:20193..23331

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S107769.g10673.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
Znf_NFX1 SMART Zinc finger, NF-X1-type
R3H_dom ProSiteProfiles R3H domain
NFX1_fam PANTHER Transcription factor NFX1 family
Znf_NFX1 Pfam Zinc finger, NF-X1-type
R3H_dom_sf Gene3D R3H domain superfamily
R3H_dom SMART R3H domain
R3H_dom Pfam R3H domain
Znf_RING ProSiteProfiles Zinc finger, RING-type
R3H_dom_sf SUPERFAMILY R3H domain superfamily
Zinc_finger_PHD-type_CS ProSitePatterns Zinc finger, PHD-type, conserved site

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function
nucleic acid binding Hs molecular function
DNA binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
RNA binding Hs molecular function
nucleus Hs cellular component
nucleolus Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
transcription from RNA polymerase II promoter Hs biological process
inflammatory response Hs biological process
zinc ion binding Hs molecular function
viral process Hs biological process
transferase activity Hs molecular function
metal ion binding Hs molecular function

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 653 0.0
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 653 0.0
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 653 0.0
nucleic acid binding Hs molecular function 653 0.0
DNA binding Hs molecular function 653 0.0
transcription factor activity, sequence-specific DNA binding Hs molecular function 653 0.0
RNA binding Hs molecular function 653 0.0
binding Hs molecular function 54.3 3.83e-07
nucleus Hs cellular component 653 0.0
nucleolus Hs cellular component 653 0.0
cytosol Hs cellular component 653 0.0
plasma membrane Hs cellular component 653 0.0
zinc ion binding Hs molecular function 653 0.0
membrane Hs cellular component 233 8.43e-64
integral component of membrane Hs cellular component 233 8.43e-64
transferase activity Hs molecular function 653 0.0
metal ion binding Hs molecular function 653 0.0

GO (InterProScan)

5 results

GO Term Analysis Type e-value
nucleic acid binding SUPERFAMILY molecular function 3.53E-17
transcription factor activity, sequence-specific DNA binding PANTHER molecular function 1.9E-284
nucleus Pfam cellular component 9.6E-5
regulation of transcription, DNA-templated Pfam biological process 9.6E-5
zinc ion binding Pfam molecular function 9.6E-5