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GENE CARD

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Gene Card

Best human hits

COL7A1; FN1; TNN

Species

M.oculata

Unique Gene ID

Moocul.g00010394

Gene Model ID

Moocul.CG.ELv1_2.S106842.g10394

Location

S106842:45169..51944

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S106842.g10394.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term Analysis Definition
Ig-like_fold Gene3D Immunoglobulin-like fold
LCCL ProSiteProfiles LCCL domain
LCCL SMART LCCL domain
FN3_dom ProSiteProfiles Fibronectin type III
LCCL_sf Gene3D LCCL domain superfamily
FN3_dom Pfam Fibronectin type III
FN3_dom CDD Fibronectin type III
FN3_sf SUPERFAMILY Fibronectin type III superfamily
FN3_dom SMART Fibronectin type III
LCCL Pfam LCCL domain
LCCL_sf SUPERFAMILY LCCL domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

37 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 127 2.61e-29
protease binding Hs molecular function 102 1.51e-21
serine-type endopeptidase inhibitor activity Hs molecular function 127 2.61e-29
receptor binding Hs molecular function 102 1.51e-21
integrin binding Hs molecular function 132 4.03e-31
protein binding Hs molecular function 132 4.03e-31
collagen binding Hs molecular function 102 1.51e-21
extracellular region Hs cellular component 132 4.03e-31
fibrinogen complex Hs cellular component 102 1.51e-21
proteinaceous extracellular matrix Hs cellular component 132 4.03e-31
collagen trimer Hs cellular component 127 2.61e-29
collagen type VII trimer Hs cellular component 127 2.61e-29
basement membrane Hs cellular component 127 2.61e-29
basal lamina Hs cellular component 102 1.51e-21
extracellular space Hs cellular component 127 2.61e-29
endoplasmic reticulum lumen Hs cellular component 127 2.61e-29
endoplasmic reticulum-Golgi intermediate compartment Hs cellular component 102 1.51e-21
protein C-terminus binding Hs molecular function 102 1.51e-21
heparin binding Hs molecular function 102 1.51e-21
cell surface Hs cellular component 132 4.03e-31
apical plasma membrane Hs cellular component 102 1.51e-21
peptidase activator activity Hs molecular function 102 1.51e-21
enzyme binding Hs molecular function 102 1.51e-21
COPII-coated ER to Golgi transport vesicle Hs cellular component 127 2.61e-29
peptidase inhibitor activity Hs molecular function 127 2.61e-29
extracellular matrix Hs cellular component 127 2.61e-29
platelet alpha granule lumen Hs cellular component 102 1.51e-21
endoplasmic reticulum-Golgi intermediate compartment membrane Hs cellular component 127 2.61e-29
identical protein binding Hs molecular function 132 4.03e-31
neuron projection Hs cellular component 132 4.03e-31
neuronal cell body Hs cellular component 132 4.03e-31
chaperone binding Hs molecular function 102 1.51e-21
extracellular exosome Hs cellular component 102 1.51e-21
blood microparticle Hs cellular component 102 1.51e-21
CA3 pyramidal cell dendrite Hs cellular component 132 4.03e-31
disordered domain specific binding Hs molecular function 102 1.51e-21
hippocampal mossy fiber expansion Hs cellular component 132 4.03e-31

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 7.51E-18