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GENE CARD

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Gene Card

Best human hits

NHLRC2; TENM1; TRIM71

Species

M.oculata

Unique Gene ID

Moocul.g00010246

Gene Model ID

Moocul.CG.ELv1_2.S105993.g10246

Location

S105993:59787..63537

Transcript Models and Sequences

  Moocul.CG.ELv1_2.S105993.g10246.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
NHL_repeat_subgr ProSiteProfiles NHL repeat, subgroup
6-blade_b-propeller_TolB-like Gene3D Six-bladed beta-propeller, TolB-like
NHL_repeat Pfam NHL repeat

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

30 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
P-body Hs cellular component 42.7 3.79e-04
RNA binding Hs molecular function 42.7 3.79e-04
ubiquitin-protein transferase activity Hs molecular function 42.7 3.79e-04
protein binding Hs molecular function 119 7.78e-29
extracellular region Hs cellular component 119 7.78e-29
intracellular Hs cellular component 42.7 3.79e-04
nucleus Hs cellular component 40.4 0.002
cytoplasm Hs cellular component 42.7 3.79e-04
endoplasmic reticulum Hs cellular component 40.4 0.002
Golgi apparatus Hs cellular component 40.4 0.002
cytoskeleton Hs cellular component 40.4 0.002
plasma membrane Hs cellular component 40.4 0.002
integral component of plasma membrane Hs cellular component 40.4 0.002
heparin binding Hs molecular function 40.4 0.002
zinc ion binding Hs molecular function 42.7 3.79e-04
membrane Hs cellular component 40.4 0.002
integral component of membrane Hs cellular component 40.4 0.002
nuclear matrix Hs cellular component 40.4 0.002
nuclear speck Hs cellular component 40.4 0.002
transferase activity Hs molecular function 42.7 3.79e-04
translation repressor activity Hs molecular function 42.7 3.79e-04
platelet alpha granule lumen Hs cellular component 119 7.78e-29
miRNA binding Hs molecular function 42.7 3.79e-04
protein homodimerization activity Hs molecular function 40.4 0.002
neuron projection Hs cellular component 40.4 0.002
metal ion binding Hs molecular function 42.7 3.79e-04
protein heterodimerization activity Hs molecular function 40.4 0.002
perinuclear region of cytoplasm Hs cellular component 40.4 0.002
cell adhesion molecule binding Hs molecular function 40.4 0.002
ubiquitin protein ligase activity Hs molecular function 42.7 3.79e-04

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Pfam molecular function 2.9E-6