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GENE CARD

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Gene Card

Best human hits

COPA; COPB2; PAFAH1B1

Species

M.occulta

Unique Gene ID

Mooccu.g00047818

Gene Model ID

Mooccu.CG.ELv1_2.S725399.g47818

Location

S725399:910..9196

Transcript Models and Sequences

  Mooccu.CG.ELv1_2.S725399.g47818.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
WD40_repeat SMART WD40 repeat
WD40_repeat ProSiteProfiles WD40 repeat
Coatomer_WD-assoc_reg Pfam Coatomer, WD associated region
G-protein_beta_WD-40_rep PRINTS G-protein beta WD-40 repeat
WD40_repeat_dom ProSiteProfiles WD40-repeat-containing domain
WD40/YVTN_repeat-like_dom_sf Gene3D WD40/YVTN repeat-like-containing domain superfamily
COPB2 PIRSF Coatomer beta' subunit (COPB2)
WD40_repeat_dom_sf SUPERFAMILY WD40-repeat-containing domain superfamily
WD40_repeat Pfam WD40 repeat

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

51 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 1443 0.0
astral microtubule Hs cellular component 111 7.54e-26
kinetochore Hs cellular component 111 7.54e-26
phospholipase A2 activity Hs molecular function 111 7.54e-26
hormone activity Hs molecular function 258 9.24e-72
structural molecule activity Hs molecular function 1443 0.0
protein binding Hs molecular function 1443 0.0
extracellular region Hs cellular component 258 9.24e-72
extracellular space Hs cellular component 258 9.24e-72
nucleus Hs cellular component 111 7.54e-26
nuclear envelope Hs cellular component 111 7.54e-26
cytoplasm Hs cellular component 1443 0.0
endoplasmic reticulum membrane Hs cellular component 1443 0.0
Golgi apparatus Hs cellular component 1443 0.0
centrosome Hs cellular component 111 7.54e-26
microtubule organizing center Hs cellular component 111 7.54e-26
spindle Hs cellular component 111 7.54e-26
cytosol Hs cellular component 1443 0.0
cytoskeleton Hs cellular component 111 7.54e-26
kinesin complex Hs cellular component 111 7.54e-26
microtubule Hs cellular component 111 7.54e-26
microtubule associated complex Hs cellular component 111 7.54e-26
cell cortex Hs cellular component 111 7.54e-26
microtubule binding Hs molecular function 111 7.54e-26
heparin binding Hs molecular function 111 7.54e-26
microtubule cytoskeleton Hs cellular component 111 7.54e-26
membrane Hs cellular component 1443 0.0
membrane coat Hs cellular component 1443 0.0
COPI vesicle coat Hs cellular component 1443 0.0
transport vesicle Hs cellular component 1443 0.0
axon Hs cellular component 111 7.54e-26
growth cone Hs cellular component 111 7.54e-26
COPI-coated vesicle membrane Hs cellular component 1443 0.0
cell leading edge Hs cellular component 111 7.54e-26
cytoplasmic vesicle Hs cellular component 1443 0.0
motile cilium Hs cellular component 111 7.54e-26
nuclear membrane Hs cellular component 111 7.54e-26
vesicle Hs cellular component 111 7.54e-26
stereocilium Hs cellular component 111 7.54e-26
dynactin binding Hs molecular function 111 7.54e-26
protein homodimerization activity Hs molecular function 111 7.54e-26
neuron projection Hs cellular component 111 7.54e-26
neuronal cell body Hs cellular component 111 7.54e-26
phospholipase binding Hs molecular function 111 7.54e-26
dynein intermediate chain binding Hs molecular function 111 7.54e-26
perinuclear region of cytoplasm Hs cellular component 111 7.54e-26
phosphoprotein binding Hs molecular function 111 7.54e-26
extracellular exosome Hs cellular component 258 9.24e-72
dynein complex binding Hs molecular function 111 7.54e-26
central region of growth cone Hs cellular component 111 7.54e-26
axon cytoplasm Hs cellular component 111 7.54e-26

GO (InterProScan)

5 results

GO Term Analysis Type e-value
structural molecule activity Pfam molecular function 4.6E-171
protein binding Gene3D molecular function 2.8E-110
intracellular protein transport Pfam biological process 4.6E-171
vesicle-mediated transport Pfam biological process 4.6E-171
membrane coat Pfam cellular component 4.6E-171