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GENE CARD

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Gene Card

Best human hits

SHMT1; SHMT2

Species

M.occulta

Unique Gene ID

Mooccu.g00046198

Gene Model ID

Mooccu.CG.ELv1_2.S713480.g46198

Location

S713480:22446..23292

Transcript Models and Sequences

  Mooccu.CG.ELv1_2.S713480.g46198.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
PyrdxlP-dep_Trfase_major Gene3D Pyridoxal phosphate-dependent transferase, major domain
PyrdxlP-dep_Trfase SUPERFAMILY Pyridoxal phosphate-dependent transferase

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

27 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
translation repressor activity, nucleic acid binding Hs molecular function 283 5.20e-94
chromatin binding Hs molecular function 273 4.48e-90
catalytic activity Hs molecular function 283 5.20e-94
glycine hydroxymethyltransferase activity Hs molecular function 283 5.20e-94
thiol-dependent ubiquitin-specific protease activity Hs molecular function 283 5.20e-94
protein binding Hs molecular function 283 5.20e-94
nucleus Hs cellular component 283 5.20e-94
cytoplasm Hs cellular component 283 5.20e-94
mitochondrion Hs cellular component 283 5.20e-94
mitochondrial inner membrane Hs cellular component 273 4.48e-90
mitochondrial intermembrane space Hs cellular component 273 4.48e-90
mitochondrial matrix Hs cellular component 273 4.48e-90
cytosol Hs cellular component 283 5.20e-94
methyltransferase activity Hs molecular function 273 4.48e-90
L-allo-threonine aldolase activity Hs molecular function 283 5.20e-94
microtubule cytoskeleton Hs cellular component 273 4.48e-90
membrane Hs cellular component 273 4.48e-90
amino acid binding Hs molecular function 283 5.20e-94
transferase activity Hs molecular function 283 5.20e-94
pyridoxal phosphate binding Hs molecular function 283 5.20e-94
mitochondrial nucleoid Hs cellular component 273 4.48e-90
identical protein binding Hs molecular function 283 5.20e-94
protein homodimerization activity Hs molecular function 283 5.20e-94
mRNA 5'-UTR binding Hs molecular function 283 5.20e-94
extracellular exosome Hs cellular component 283 5.20e-94
BRISC complex Hs cellular component 273 4.48e-90
serine binding Hs molecular function 283 5.20e-94

GO (InterProScan)

1 result

GO Term Analysis Type e-value
catalytic activity Gene3D molecular function 2.1E-99