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GENE CARD

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  1. EST 'FF710828.1'

Gene Card

Best human hits

SOX11; SOX12; SOX4

Species

M.occulta

Unique Gene ID

Mooccu.g00044942

Gene Model ID

Mooccu.CG.ELv1_2.S702957.g44942

Location

S702957:1178..15414

Transcript Models and Sequences

  Mooccu.CG.ELv1_2.S702957.g44942.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
HMG_box_dom SMART High mobility group box domain
HMG_box_dom Pfam High mobility group box domain
HMG_box_dom ProSiteProfiles High mobility group box domain
HMG_box_dom_sf Gene3D High mobility group box domain superfamily
HMG_box_dom_sf SUPERFAMILY High mobility group box domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
transcription regulatory region sequence-specific DNA binding Hs molecular function 131 6.39e-33
RNA polymerase II core promoter sequence-specific DNA binding Hs molecular function 130 9.62e-33
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 131 6.39e-33
core promoter sequence-specific DNA binding Hs molecular function 131 6.39e-33
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 131 6.39e-33
RNA polymerase II transcription coactivator activity Hs molecular function 131 6.39e-33
enhancer sequence-specific DNA binding Hs molecular function 130 9.62e-33
DNA binding Hs molecular function 131 6.39e-33
transcription factor activity, sequence-specific DNA binding Hs molecular function 131 6.39e-33
protein binding Hs molecular function 131 6.39e-33
nucleus Hs cellular component 131 6.39e-33
nucleoplasm Hs cellular component 131 6.39e-33
cytoplasm Hs cellular component 131 6.39e-33
mitochondrion Hs cellular component 131 6.39e-33
translation factor activity, RNA binding Hs molecular function 130 9.62e-33
protein-DNA complex Hs cellular component 123 2.70e-31
nuclear transcription factor complex Hs cellular component 131 6.39e-33
protein heterodimerization activity Hs molecular function 131 6.39e-33

GO (InterProScan)

No result

GO Term Analysis Type e-value