Login
Help

GENE CARD

Submit your Data

  1. Gene 'Phmamm.CG.MTP2014.S1...'

Gene Card

Best human hits

GAPVD1; RABGEF1; RIN2

Species

M.occulta

Unique Gene ID

Mooccu.g00040020

Gene Model ID

Mooccu.CG.ELv1_2.S654273.g40020

Location

S654273:10501..17350

Transcript Models and Sequences

  Mooccu.CG.ELv1_2.S654273.g40020.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
VPS9_dom_sf Gene3D VPS9 domain superfamily
VPS9_dom_sf SUPERFAMILY VPS9 domain superfamily
VPS9 Pfam VPS9 domain
VPS9 ProSiteProfiles VPS9 domain
VPS9 SMART VPS9 domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
DNA binding Hs molecular function 259 4.86e-83
guanyl-nucleotide exchange factor activity Hs molecular function 76.3 3.54e-15
GTPase activator activity Hs molecular function 76.3 3.54e-15
protein binding Hs molecular function 259 4.86e-83
nucleolus Hs cellular component 259 4.86e-83
cytoplasm Hs cellular component 259 4.86e-83
endosome Hs cellular component 259 4.86e-83
early endosome Hs cellular component 259 4.86e-83
cytosol Hs cellular component 259 4.86e-83
zinc ion binding Hs molecular function 259 4.86e-83
membrane Hs cellular component 76.3 3.54e-15
Rab guanyl-nucleotide exchange factor activity Hs molecular function 259 4.86e-83
Rab GTPase binding Hs molecular function 259 4.86e-83
GTPase regulator activity Hs molecular function 53.9 7.24e-08
early endosome membrane Hs cellular component 259 4.86e-83
GTPase activating protein binding Hs molecular function 76.3 3.54e-15
cadherin binding Hs molecular function 76.3 3.54e-15
metal ion binding Hs molecular function 259 4.86e-83
recycling endosome Hs cellular component 259 4.86e-83

GO (InterProScan)

No result

GO Term Analysis Type e-value