Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

MYD88; TLR4

Species

M.occulta

Unique Gene ID

Mooccu.g00022783

Gene Model ID

Mooccu.CG.ELv1_2.S458657.g22783

Location

S458657:5151..8902

Transcript Models and Sequences

  Mooccu.CG.ELv1_2.S458657.g22783.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Death_domain ProSiteProfiles Death domain
DEATH-like_dom_sf SUPERFAMILY Death-like domain superfamily
TIR_dom Pfam Toll/interleukin-1 receptor homology (TIR) domain
Toll_tir_struct_dom_sf Gene3D Toll/interleukin-1 receptor homology (TIR) domain superfamily
TIR_dom ProSiteProfiles Toll/interleukin-1 receptor homology (TIR) domain
Toll_tir_struct_dom_sf SUPERFAMILY Toll/interleukin-1 receptor homology (TIR) domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

32 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
lipopolysaccharide binding Hs molecular function 39.7 0.003
lipopolysaccharide receptor activity Hs molecular function 39.7 0.003
receptor activity Hs molecular function 39.7 0.003
transmembrane signaling receptor activity Hs molecular function 39.7 0.003
receptor binding Hs molecular function 91.7 9.36e-21
Toll binding Hs molecular function 91.7 9.36e-21
death receptor binding Hs molecular function 91.7 9.36e-21
interleukin-1 receptor binding Hs molecular function 91.7 9.36e-21
protein binding Hs molecular function 91.7 9.36e-21
intracellular Hs cellular component 39.7 0.003
nucleus Hs cellular component 91.7 9.36e-21
cytoplasm Hs cellular component 91.7 9.36e-21
endosome Hs cellular component 39.7 0.003
early endosome Hs cellular component 39.7 0.003
cytosol Hs cellular component 91.7 9.36e-21
plasma membrane Hs cellular component 91.7 9.36e-21
integral component of plasma membrane Hs cellular component 39.7 0.003
external side of plasma membrane Hs cellular component 39.7 0.003
cell surface Hs cellular component 39.7 0.003
endosome membrane Hs cellular component 91.7 9.36e-21
postsynaptic density Hs cellular component 91.7 9.36e-21
membrane Hs cellular component 39.7 0.003
integral component of membrane Hs cellular component 39.7 0.003
intrinsic component of plasma membrane Hs cellular component 39.7 0.003
Toll-like receptor binding Hs molecular function 91.7 9.36e-21
identical protein binding Hs molecular function 91.7 9.36e-21
receptor complex Hs cellular component 39.7 0.003
protein self-association Hs molecular function 91.7 9.36e-21
lipopolysaccharide receptor complex Hs cellular component 39.7 0.003
protein heterodimerization activity Hs molecular function 39.7 0.003
perinuclear region of cytoplasm Hs cellular component 39.7 0.003
TIR domain binding Hs molecular function 91.7 9.36e-21

GO (InterProScan)

2 results

GO Term Analysis Type e-value
protein binding Pfam molecular function 2.1E-6
signal transduction Pfam biological process 2.1E-6