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GENE CARD

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Gene Card

Best human hits

DNMT1; KDM2B; TRDMT1

Species

M.occulta

Unique Gene ID

Mooccu.g00017345

Gene Model ID

Mooccu.CG.ELv1_2.S384461.g17345

Location

S384461:1214..5938

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

14 results

IPR Term Analysis Definition
BAH_dom ProSiteProfiles Bromo adjacent homology (BAH) domain
C5_DNA_meth_AS ProSitePatterns DNA methylase, C-5 cytosine-specific, active site
SAM-dependent_MTases SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferase
Znf_CXXC Pfam Zinc finger, CXXC-type
BAH_dom Pfam Bromo adjacent homology (BAH) domain
Cytosine_MeTrfase1_RFD Pfam DNA (cytosine-5)-methyltransferase 1, replication foci domain
C5_MeTfrase PRINTS C-5 cytosine methyltransferase
Znf_CXXC ProSiteProfiles Zinc finger, CXXC-type
C5_MeTfrase TIGRFAM C-5 cytosine methyltransferase
C5_MeTfrase Pfam C-5 cytosine methyltransferase
C5_MeTfrase ProSiteProfiles C-5 cytosine methyltransferase
C5_meth_CS ProSitePatterns DNA methylase, C-5 cytosine-specific, conserved site
DNMT1-like PIRSF DNA (cytosine-5)-methyltransferase 1-like
BAH_dom SMART Bromo adjacent homology (BAH) domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

28 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
heterochromatin Hs cellular component 1400 0
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 58.2 3.20e-08
DNA binding Hs molecular function 1400 0
chromatin binding Hs molecular function 1400 0
RNA binding Hs molecular function 1400 0
DNA (cytosine-5-)-methyltransferase activity Hs molecular function 1400 0
protein binding Hs molecular function 1400 0
nucleus Hs cellular component 1400 0
nucleoplasm Hs cellular component 1400 0
replication fork Hs cellular component 1400 0
pericentric heterochromatin Hs cellular component 1400 0
nucleolus Hs cellular component 58.2 3.20e-08
cytoplasm Hs cellular component 54.3 3.16e-07
methyltransferase activity Hs molecular function 1400 0
tRNA methyltransferase activity Hs molecular function 54.3 3.16e-07
zinc ion binding Hs molecular function 1400 0
methyl-CpG binding Hs molecular function 1400 0
DNA-methyltransferase activity Hs molecular function 1400 0
tRNA (cytosine-5-)-methyltransferase activity Hs molecular function 54.3 3.16e-07
oxidoreductase activity Hs molecular function 58.2 3.20e-08
transferase activity Hs molecular function 1400 0
rRNA binding Hs molecular function 58.2 3.20e-08
PcG protein complex Hs cellular component 58.2 3.20e-08
histone demethylase activity Hs molecular function 58.2 3.20e-08
metal ion binding Hs molecular function 1400 0
dioxygenase activity Hs molecular function 58.2 3.20e-08
histone demethylase activity (H3-K36 specific) Hs molecular function 58.2 3.20e-08
promoter-specific chromatin binding Hs molecular function 1400 0

GO (InterProScan)

7 results

GO Term Analysis Type e-value
DNA binding Pfam molecular function 7.9E-13
chromatin binding SMART molecular function 1.3E-24
DNA (cytosine-5-)-methyltransferase activity PIRSF molecular function 0.0
nucleus PIRSF cellular component 0.0
methyltransferase activity Pfam molecular function 1.1E-53
zinc ion binding Pfam molecular function 7.9E-13
C-5 methylation of cytosine PIRSF biological process 0.0