Login
Help

GENE CARD

Submit your Data

  1. Gene 'Mooccu.CG.ELv1_2.S35...'

Gene Card

Best human hits

CSMD1; CSMD3; PAMR1

Species

M.occulta

Unique Gene ID

Mooccu.g00015516

Gene Model ID

Mooccu.CG.ELv1_2.S355990.g15516

Location

S355990:38838..39742

Transcript Models and Sequences

  Mooccu.CG.ELv1_2.S355990.g15516.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Sushi/SCR/CCP_sf SUPERFAMILY Sushi/SCR/CCP superfamily
Sushi_SCR_CCP_dom ProSiteProfiles Sushi/SCR/CCP domain
Sushi_SCR_CCP_dom SMART Sushi/SCR/CCP domain
Sushi_SCR_CCP_dom CDD Sushi/SCR/CCP domain
Sushi_SCR_CCP_dom Pfam Sushi/SCR/CCP domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

7 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
serine-type endopeptidase activity Hs molecular function 41.6 7.02e-05
calcium ion binding Hs molecular function 41.6 7.02e-05
extracellular region Hs cellular component 41.6 7.02e-05
extracellular space Hs cellular component 41.6 7.02e-05
plasma membrane Hs cellular component 52.8 1.04e-08
membrane Hs cellular component 52.8 1.04e-08
integral component of membrane Hs cellular component 52.8 1.04e-08

GO (InterProScan)

No result

GO Term Analysis Type e-value