Login
Help

GENE CARD

Submit your Data

  1. Gene 'Mooccu.CG.ELv1_2.S32...'

Gene Card

Best human hits

DDX24; DDX47

Species

M.occulta

Unique Gene ID

Mooccu.g00013941

Gene Model ID

Mooccu.CG.ELv1_2.S329479.g13941

Location

S329479:20870..29760

Transcript Models and Sequences

  Mooccu.CG.ELv1_2.S329479.g13941.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
Helicase_ATP-bd SMART Helicase superfamily 1/2, ATP-binding domain
DEAD/DEAH_box_helicase_dom Pfam DEAD/DEAH box helicase domain
Helicase_C CDD Helicase, C-terminal
RNA-helicase_DEAD-box_CS ProSitePatterns ATP-dependent RNA helicase DEAD-box, conserved site
Helicase_ATP-bd ProSiteProfiles Helicase superfamily 1/2, ATP-binding domain
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
RNA_helicase_DEAD_Q_motif ProSiteProfiles RNA helicase, DEAD-box type, Q motif
Helicase_C SMART Helicase, C-terminal
Helicase_C ProSiteProfiles Helicase, C-terminal
Helicase_C Pfam Helicase, C-terminal

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 400 4.01e-128
nucleic acid binding Hs molecular function 400 4.01e-128
RNA binding Hs molecular function 400 4.01e-128
RNA helicase activity Hs molecular function 400 4.01e-128
ATP-dependent RNA helicase activity Hs molecular function 400 4.01e-128
helicase activity Hs molecular function 400 4.01e-128
protein binding Hs molecular function 400 4.01e-128
ATP binding Hs molecular function 400 4.01e-128
nucleus Hs cellular component 204 2.87e-58
nucleoplasm Hs cellular component 204 2.87e-58
nucleolus Hs cellular component 400 4.01e-128
cytoplasm Hs cellular component 400 4.01e-128
membrane Hs cellular component 400 4.01e-128
hydrolase activity Hs molecular function 400 4.01e-128

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleic acid binding Pfam molecular function 3.1E-40
ATP binding Pfam molecular function 3.1E-40