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GENE CARD

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  1. Pub 'PMID:19193153'

Gene Card

Best human hits

EMX1; EMX2; VAX1

Species

M.occidentalis

Unique Gene ID

Moocci.g00031141

Gene Model ID

Moocci.CG.ELv1_2.S657065.g31141

Location

S657065:36456..39313

Transcript Models and Sequences

  Moocci.CG.ELv1_2.S657065.g31141.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
Homeobox_dom ProSiteProfiles Homeobox domain
Homeobox_dom SMART Homeobox domain
Homeobox_dom Pfam Homeobox domain
Homeobox_CS ProSitePatterns Homeobox, conserved site
Homeobox_dom CDD Homeobox domain
Homeobox-like_sf SUPERFAMILY Homeobox-like domain superfamily
Homeobox_metazoa PRINTS Homeobox domain, metazoa

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
DNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleolus Hs cellular component
cytoplasm Hs cellular component
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
multicellular organism development Hs biological process
brain development Hs biological process
post-embryonic development Hs biological process
anterior/posterior pattern specification Hs biological process
regulation of gene expression Hs biological process
telencephalon development Hs biological process
cell proliferation in forebrain Hs biological process
forebrain cell migration Hs biological process
cerebral cortex neuron differentiation Hs biological process
cerebral cortex development Hs biological process
neuron differentiation Hs biological process
forebrain development Hs biological process
response to drug Hs biological process
sequence-specific DNA binding Hs molecular function
brain morphogenesis Hs biological process
regulation of oligodendrocyte progenitor proliferation Hs biological process
renal system development Hs biological process
neuron projection extension Hs biological process

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 134 2.03e-35
RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding Hs molecular function 86.7 1.48e-18
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 86.7 1.48e-18
DNA binding Hs molecular function 134 2.03e-35
transcription factor activity, sequence-specific DNA binding Hs molecular function 86.7 1.48e-18
protein binding Hs molecular function 134 2.03e-35
nucleus Hs cellular component 134 2.03e-35
nucleolus Hs cellular component 134 2.03e-35
cytoplasm Hs cellular component 134 2.03e-35
chromatin DNA binding Hs molecular function 86.7 1.48e-18
sequence-specific DNA binding Hs molecular function 134 2.03e-35

GO (InterProScan)

3 results

GO Term Analysis Type e-value
DNA binding SMART molecular function 3.0E-26
regulation of transcription, DNA-templated ProSitePatterns biological process
sequence-specific DNA binding ProSitePatterns molecular function